RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 DHRS12A0PJE2 317 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 SIGLEC16A6NMB1 481 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 POU1F1P28069 291 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 RFX4Q33E94 735 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 CNPY1Q3B7I2 92 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 FAM117BQ6P1L5 589 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 UTP15Q8TED0 518 aaKnown RBP19.98■□□□□ 0.79
SHANK1-203ENST00000391813 RIBC2Q9H4K1 309 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 PCDHA11Q9Y5I1 949 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 TNFRSF21O75509 655 aa19.97■□□□□ 0.79
SHANK1-203ENST00000391813 SPIRE1Q08AE8 756 aa19.97■□□□□ 0.79
SHANK1-203ENST00000391813 UPF1Q92900 1129 aaKnown RBP eCLIP19.97■□□□□ 0.79
SHANK1-203ENST00000391813 PWWP2AQ96N64 755 aa19.97■□□□□ 0.79
SHANK1-203ENST00000391813 EBNA1BP2Q99848 306 aaKnown RBP19.97■□□□□ 0.79
SHANK1-203ENST00000391813 DYRK4Q9NR20 520 aa19.97■□□□□ 0.79
SHANK1-203ENST00000391813 PRRG1O14668 218 aa19.97■□□□□ 0.79
SHANK1-203ENST00000391813 TSNQ15631 228 aaKnown RBP19.97■□□□□ 0.79
SHANK1-203ENST00000391813 TRIM71Q2Q1W2 868 aaKnown RBP19.97■□□□□ 0.79
SHANK1-203ENST00000391813 EGFLAMQ63HQ2 1017 aa19.97■□□□□ 0.79
SHANK1-203ENST00000391813 KLHL17Q6TDP4 642 aa19.97■□□□□ 0.79
SHANK1-203ENST00000391813 FBXO39Q8N4B4 442 aa19.97■□□□□ 0.79
SHANK1-203ENST00000391813 FNDC5Q8NAU1 212 aa19.97■□□□□ 0.79
SHANK1-203ENST00000391813 LEMD2Q8NC56 503 aa19.97■□□□□ 0.79
SHANK1-203ENST00000391813 ZHX1-C8orf76Q96EF9 292 aa19.97■□□□□ 0.79
SHANK1-203ENST00000391813 RNFT2Q96EX2 444 aa19.97■□□□□ 0.79
SHANK1-203ENST00000391813 PCDHB8Q9UN66 801 aa19.97■□□□□ 0.79
SHANK1-203ENST00000391813 BCL9LQ86UU0 1499 aa19.97■□□□□ 0.79
SHANK1-203ENST00000391813 CARNS1A5YM72 827 aa19.97■□□□□ 0.79
SHANK1-203ENST00000391813 IL12AP29459 219 aa19.97■□□□□ 0.79
SHANK1-203ENST00000391813 RTP1P59025 263 aa19.97■□□□□ 0.79
SHANK1-203ENST00000391813 AKAP14Q86UN6 197 aa19.97■□□□□ 0.79
SHANK1-203ENST00000391813 CYP4Z1Q86W10 505 aa19.97■□□□□ 0.79
SHANK1-203ENST00000391813 PHF13Q86YI8 300 aaPredicted RBP19.97■□□□□ 0.79
SHANK1-203ENST00000391813 SPRTNQ9H040 489 aaPredicted RBP19.97■□□□□ 0.79
SHANK1-203ENST00000391813 CCNB1IP1Q9NPC3 277 aa19.97■□□□□ 0.79
SHANK1-203ENST00000391813 RGS18Q9NS28 235 aa19.97■□□□□ 0.79
SHANK1-203ENST00000391813 ROBO3Q96MS0 1386 aa19.97■□□□□ 0.79
SHANK1-203ENST00000391813 hCG_1818297A0A087WSY0 165 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 SYNCRIPO60506 623 aaKnown RBP19.96■□□□□ 0.79
SHANK1-203ENST00000391813 ATP5F1P24539 256 aaPredicted RBP19.96■□□□□ 0.79
SHANK1-203ENST00000391813 CACNB2Q08289 660 aaPredicted RBP19.96■□□□□ 0.79
SHANK1-203ENST00000391813 RAB42Q8N4Z0 105 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 PSMA8Q8TAA3 256 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 KLRG1Q96E93 195 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 POMKQ9H5K3 350 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 SPASTQ9UBP0 616 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 CSE1LP55060 971 aaKnown RBP19.96■□□□□ 0.79
SHANK1-203ENST00000391813 SYTL3Q4VX76 610 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 MZT2BQ6NZ67 158 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 RNF208Q9H0X6 261 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 KCNMB3Q9NPA1 279 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 LNPEPQ9UIQ6 1025 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 CDH22Q9UJ99 828 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 SALL4Q9UJQ4 1053 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 PLLPQ9Y342 182 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 ITGA2BP08514 1039 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 CCT3P49368 545 aaKnown RBP19.96■□□□□ 0.79
SHANK1-203ENST00000391813 RAB27AP51159 221 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 INO80DQ53TQ3 878 aaPredicted RBP19.96■□□□□ 0.79
SHANK1-203ENST00000391813 FAM228AQ86W67 206 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 C12orf50Q8NA57 414 aaPredicted RBP19.96■□□□□ 0.79
SHANK1-203ENST00000391813 BARX2Q9UMQ3 279 aaPredicted RBP19.96■□□□□ 0.79
SHANK1-203ENST00000391813 PLA2G4CQ9UP65 541 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 NR2E3Q9Y5X4 410 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 KRT87PA6NCN2 255 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 FAM86B1E9PN63 330 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 VAPBO95292 243 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 KRT6AP02538 564 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 FAM86B2P0C5J1 330 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 SOAT1P35610 550 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 MAGEA10P43363 369 aaPredicted RBP19.96■□□□□ 0.79
SHANK1-203ENST00000391813 CLCN3P51790 818 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 BST2Q10589 180 aaKnown RBP19.96■□□□□ 0.79
SHANK1-203ENST00000391813 ELAVL2Q12926 359 aaKnown RBP19.96■□□□□ 0.79
SHANK1-203ENST00000391813 ORC1Q13415 861 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 AMIGO2Q86SJ2 522 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 MTMR14Q8NCE2 650 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 SLC44A1Q8WWI5 657 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 CERS2Q96G23 380 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 GIN1Q9NXP7 522 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 EHD3Q9NZN3 535 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 ZNF180Q9UJW8 692 aa19.96■□□□□ 0.79
SHANK1-203ENST00000391813 PIPSLA2A3N6 862 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 H7C4K7 107 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 HMGCRP04035 888 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 OR56A4Q8NGH8 313 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 TRNAU1APQ9NX07 287 aaKnown RBP19.95■□□□□ 0.78
SHANK1-203ENST00000391813 PACSIN3Q9UKS6 424 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 EFR3BQ9Y2G0 817 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 A0A0A0MRY4 1105 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 H0YC42 278 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 TPD52L2O43399 206 aaKnown RBP19.95■□□□□ 0.78
SHANK1-203ENST00000391813 KLF10Q13118 480 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 COL9A3Q14050 684 aaPredicted RBP19.95■□□□□ 0.78
SHANK1-203ENST00000391813 ZNF605Q86T29 641 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 CHSY1Q86X52 802 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 MYO1HQ8N1T3 1032 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 DPF3Q92784 378 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 SPATA13Q96N96 652 aa19.95■□□□□ 0.78
SHANK1-203ENST00000391813 ACE2Q9BYF1 805 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms