RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 DNTTP04053 509 aa15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 COMTP21964 271 aa15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 RECQLP46063 649 aaPredicted RBP15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 ARSEP51690 589 aa15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 NAP1L1P55209 391 aaKnown RBP15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 RPS14P62263 151 aaKnown RBP15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 KIF5AQ12840 1032 aa15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 SFSWAPQ12872 951 aaKnown RBP15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 SERINC3Q13530 473 aa15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 DPYSL3Q14195 570 aa15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 MAP7D1Q3KQU3 841 aa15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 ATP13A4Q4VNC1 1196 aa15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 ODF2Q5BJF6 829 aa15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 C22orf39Q6P5X5 142 aa15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 SLC36A4Q6YBV0 504 aa15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 Q6ZVU0 165 aa15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 DSG4Q86SJ6 1040 aa15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 CACUL1Q86Y37 369 aa15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 RHOT1Q8IXI2 618 aa15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 PCDH20Q8N6Y1 951 aaKnown RBP15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 CASKIN2Q8WXE0 1202 aa15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 RLN3Q8WXF3 142 aa15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 CELF6Q96J87 481 aaKnown RBP15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 DESI2Q9BSY9 194 aa15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 KLHL11Q9NVR0 708 aa15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 USP36Q9P275 1121 aaKnown RBP15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 SCML1Q9UN30 329 aa15.35■□□□□ 0.05
IGHV3-53-201ENST00000390627 K7ERQ8 282 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 ALOX15BO15296 676 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 PSTPIP1O43586 416 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 BUB1O43683 1085 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 RHOBTB1O94844 696 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 CD48P09326 243 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 VAV1P15498 845 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 AMPD1P23109 780 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 OXTRP30559 389 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 CST6Q15828 149 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 IFI16Q16666 785 aaKnown RBP15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 AFMIDQ63HM1 303 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 DAAM2Q86T65 1068 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 VSIG1Q86XK7 387 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 LRRC8AQ8IWT6 810 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 STK40Q8N2I9 435 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 NPWQ8N729 165 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 SUMF1Q8NBK3 374 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 TPCN2Q8NHX9 752 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 ISG20Q96AZ6 181 aaKnown RBP15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 ZC3H10Q96K80 434 aaKnown RBP15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 SLC39A8Q9C0K1 460 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 LACRTQ9GZZ8 138 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 KLC2Q9H0B6 622 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 ITM2CQ9NQX7 267 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 DDX56Q9NY93 547 aaKnown RBP15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 CYP8B1Q9UNU6 501 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 INVSQ9Y283 1065 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 HYOU1Q9Y4L1 999 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 ALG6Q9Y672 507 aa15.34■□□□□ 0.05
IGHV3-53-201ENST00000390627 PLXND1Q9Y4D7 1925 aa15.33■□□□□ 0.05
IGHV3-53-201ENST00000390627 IGHV1OR15-9A0A0B4J2B8 117 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 LRRD1A4D1F6 860 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 PRR23AA6NEV1 266 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 ZNF487B1APH4 448 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 C1QTNF3-AMACRE9PGA6 284 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 DFFAO00273 331 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 MAP3K13O43283 966 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 SMAD6O43541 496 aaKnown RBP15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 BNIP3LO60238 219 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 ADH1BP00325 375 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 IGLV3-19P01714 112 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 KRT1P04264 644 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 KDELR1P24390 212 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 CD6P30203 668 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 PAPOLAP51003 745 aaKnown RBP15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 MMRN1Q13201 1228 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 PLK5Q496M5 336 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 INO80DQ53TQ3 878 aaPredicted RBP15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 FAM46CQ5VWP2 391 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 LAIR1Q6GTX8 287 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 KBTBD6Q86V97 674 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 MMAAQ8IVH4 418 aaKnown RBP15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 ARHGAP12Q8IWW6 846 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 FAF2Q96CS3 445 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 FAM129BQ96TA1 746 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 TSGA10Q9BZW7 698 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 PABPC3Q9H361 631 aaKnown RBP15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 SP110Q9HB58 689 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 UBA2Q9UBT2 640 aaPredicted RBP15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 SALL4Q9UJQ4 1053 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 GMEB2Q9UKD1 530 aa15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 FCF1Q9Y324 198 aaKnown RBP15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 NYNRINQ9P2P1 1898 aaKnown RBP15.33■□□□□ 0.04
IGHV3-53-201ENST00000390627 MCF2LO15068 1137 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 PRAMEF11O60813 436 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 TMCC1O94876 653 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 CD160O95971 181 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 IL1BP01584 269 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 TNNT1P13805 278 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 C5AR1P21730 350 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 BCKDHBP21953 392 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 IL4RP24394 825 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms