RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 FAM184BQ9ULE4 1060 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 PCDHGA5Q9Y5G8 931 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 PCDHGA1Q9Y5H4 931 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 CAPN7Q9Y6W3 813 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 LRRC7Q96NW7 1537 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 AOX1Q06278 1338 aa6.69□□□□□ -1.34
TRAV35-201ENST00000390462 ZC3H13Q5T200 1668 aaKnown RBP6.68□□□□□ -1.34
TRAV35-201ENST00000390462 CDC42BPAQ5VT25 1732 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 C2orf78A6NCI8 922 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 PER2O15055 1255 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 ADAM23O75077 832 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 TADA2AO75478 443 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 PALMO75781 387 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 REC8O95072 547 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 F13BP05160 661 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 PDHA1P08559 390 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 FERP16591 822 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 PTPN3P26045 913 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 TNFRSF8P28908 595 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 HTR7P34969 479 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 IL15P40933 162 aaPredicted RBP6.68□□□□□ -1.34
TRAV35-201ENST00000390462 CASRP41180 1078 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 PSMC4P43686 418 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 TOB1P50616 345 aaPredicted RBP6.68□□□□□ -1.34
TRAV35-201ENST00000390462 HK2P52789 917 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 CAPZA1P52907 286 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 RPL15P61313 204 aaKnown RBP6.68□□□□□ -1.34
TRAV35-201ENST00000390462 ARF5P84085 180 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 LMAN2Q12907 356 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 NPRL3Q12980 569 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 CSTF3Q12996 717 aaKnown RBP6.68□□□□□ -1.34
TRAV35-201ENST00000390462 EIF4HQ15056 248 aaKnown RBP6.68□□□□□ -1.34
TRAV35-201ENST00000390462 GSTA3Q16772 222 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 ANKRD20A4Q4UJ75 823 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 ANKRD20A8PQ5CZ79 823 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 ANKRD20A2Q5SQ80 823 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 ANKRD20A1Q5TYW2 823 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 ANKRD20A3Q5VUR7 823 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 TMEM81Q6P7N7 255 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 LAYNQ6UX15 382 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 CCBE1Q6UXH8 406 aaPredicted RBP6.68□□□□□ -1.34
TRAV35-201ENST00000390462 CLEC9AQ6UXN8 241 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 CD300LDQ6UXZ3 194 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 SLC46A3Q7Z3Q1 461 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 KRT27Q7Z3Y8 459 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 DSG4Q86SJ6 1040 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 HOOK3Q86VS8 718 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 CNTN4Q8IWV2 1026 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 PDPRQ8NCN5 879 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 SHCBP1Q8NEM2 672 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 SLC35B2Q8TB61 432 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 HASPINQ8TF76 798 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 CDCA5Q96FF9 252 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 LRIG1Q96JA1 1093 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 MGME1Q9BQP7 344 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 SLC5A7Q9GZV3 580 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 C7orf69Q9H7B7 122 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 GBA2Q9HCG7 927 aaPredicted RBP6.68□□□□□ -1.34
TRAV35-201ENST00000390462 LRRC4CQ9HCJ2 640 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 PDE11AQ9HCR9 933 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 FBXO28Q9NVF7 368 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 THAP1Q9NVV9 213 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 ETAA1Q9NY74 926 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 SLAMF8Q9P0V8 285 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 APPL1Q9UKG1 709 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 MRPS17Q9Y2R5 130 aaKnown RBP6.68□□□□□ -1.34
TRAV35-201ENST00000390462 SNX14Q9Y5W7 946 aa6.68□□□□□ -1.34
TRAV35-201ENST00000390462 SAMD9LQ8IVG5 1584 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 LOC100509620A0A075B734 347 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 EIF3CLB5ME19 914 aaKnown RBP6.67□□□□□ -1.34
TRAV35-201ENST00000390462 ADM5C9JUS6 153 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 AGPSO00116 658 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 LIASO43766 372 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 FSTP19883 344 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 CCNA2P20248 432 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 PBLDP30039 288 aaPredicted RBP6.67□□□□□ -1.34
TRAV35-201ENST00000390462 HNF1BP35680 557 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 CHRNA4P43681 627 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 GATMP50440 423 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 ZNF81P51508 661 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 CCR3P51677 355 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 YPEL5P62699 121 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 IFT88Q13099 833 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 IL11RAQ14626 422 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 ACOX1Q15067 660 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 SLC39A12Q504Y0 691 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 CEP55Q53EZ4 464 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 HSP90AA5PQ58FG0 334 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 JADE1Q6IE81 842 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 CCDC144NLQ6NUI1 221 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 ADCK2Q7Z695 626 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 IGDCC3Q8IVU1 814 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 TMEFF1Q8IYR6 380 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 PI4KAP1Q8N8J0 262 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 SHC3Q92529 594 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 INTS4Q96HW7 963 aaKnown RBP6.67□□□□□ -1.34
TRAV35-201ENST00000390462 NLRP4Q96MN2 994 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 PAFAH2Q99487 392 aa6.67□□□□□ -1.34
TRAV35-201ENST00000390462 FERMT1Q9BQL6 677 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms