RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 RNF19BQ6ZMZ0 732 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 AMIGO3Q86WK7 504 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 CCDC117Q8IWD4 279 aaPredicted RBP14.47□□□□□ -0.09
RTF1-201ENST00000389629 DEFB106AQ8N104 65 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 TCF12Q99081 682 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 SLC17A6Q9P2U8 582 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 KANSL1LA0AUZ9 987 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 AMHP03971 560 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 GOT1P17174 413 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 LSAMPQ13449 338 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 ADGRE1Q14246 886 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 SH3PXD2AQ5TCZ1 1133 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 FAM83AQ86UY5 434 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 OFCC1Q8IZS5 231 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 DNAJB14Q8TBM8 379 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 LPGAT1Q92604 370 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 ROGDIQ9GZN7 287 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 ZFYVE28Q9HCC9 887 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 TEKT2Q9UIF3 430 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 SLC8A2Q9UPR5 921 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 MATN2O00339 956 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 SNRPB2P08579 225 aaKnown RBP14.47□□□□□ -0.09
RTF1-201ENST00000389629 ALOX12P18054 663 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 GSSP48637 474 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 BST2Q10589 180 aaKnown RBP14.47□□□□□ -0.09
RTF1-201ENST00000389629 FRMD7Q6ZUT3 714 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 SYTL1Q8IYJ3 562 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 RORBQ92753 470 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 AKT1S1Q96B36 256 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 PTCD3Q96EY7 689 aaKnown RBP14.47□□□□□ -0.09
RTF1-201ENST00000389629 PARVBQ9HBI1 364 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 TMEM216Q9P0N5 145 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 BOLA2-SMG1P6H3BVE0 249 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 PLIN3O60664 434 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 MT-ND1P03886 318 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 TFPTP0C1Z6 253 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 XRCC1P18887 633 aaPredicted RBP14.47□□□□□ -0.09
RTF1-201ENST00000389629 INAQ16352 499 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 SNX31Q8N9S9 440 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 RMDN1Q96DB5 314 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 GPATCH1Q9BRR8 931 aaKnown RBP14.47□□□□□ -0.09
RTF1-201ENST00000389629 UBAP1Q9NZ09 502 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 FZD1Q9UP38 647 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 TRAFD1O14545 582 aaPredicted RBP14.46□□□□□ -0.09
RTF1-201ENST00000389629 GSNP06396 782 aa14.46□□□□□ -0.09
RTF1-201ENST00000389629 PLEKHG4Q58EX7 1191 aa14.46□□□□□ -0.09
RTF1-201ENST00000389629 METTL7BQ6UX53 244 aa14.46□□□□□ -0.09
RTF1-201ENST00000389629 IGDCC3Q8IVU1 814 aa14.46□□□□□ -0.09
RTF1-201ENST00000389629 OR8H2Q8N162 312 aa14.46□□□□□ -0.09
RTF1-201ENST00000389629 FBXO27Q8NI29 283 aa14.46□□□□□ -0.09
RTF1-201ENST00000389629 PSMA8Q8TAA3 256 aa14.46□□□□□ -0.09
RTF1-201ENST00000389629 FIG4Q92562 907 aa14.46□□□□□ -0.09
RTF1-201ENST00000389629 ZNF358Q9NW07 568 aa14.46□□□□□ -0.09
RTF1-201ENST00000389629 HACL1Q9UJ83 578 aa14.46□□□□□ -0.09
RTF1-201ENST00000389629 KCNU1A8MYU2 1149 aa14.46□□□□□ -0.09
RTF1-201ENST00000389629 STX16-NPEPL1H3BU86 382 aa14.46□□□□□ -0.09
RTF1-201ENST00000389629 MAGEB3O15480 346 aa14.46□□□□□ -0.09
RTF1-201ENST00000389629 DHX15O43143 795 aaKnown RBP14.46□□□□□ -0.09
RTF1-201ENST00000389629 PCNAP12004 261 aa14.46□□□□□ -0.09
RTF1-201ENST00000389629 CDH2P19022 906 aaPredicted RBP14.46□□□□□ -0.09
RTF1-201ENST00000389629 THOP1P52888 689 aa14.46□□□□□ -0.09
RTF1-201ENST00000389629 NAB1Q13506 487 aa14.46□□□□□ -0.09
RTF1-201ENST00000389629 ZNF470Q6ECI4 717 aa14.46□□□□□ -0.09
RTF1-201ENST00000389629 SFRP1Q8N474 314 aa14.46□□□□□ -0.09
RTF1-201ENST00000389629 WDCPQ9H6R7 721 aa14.46□□□□□ -0.09
RTF1-201ENST00000389629 ERI2A8K979 691 aaKnown RBP14.46□□□□□ -0.1
RTF1-201ENST00000389629 WNT10BO00744 389 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 CKMT2P17540 419 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 ITGAXP20702 1163 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 ARPP19P56211 112 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 FKBP1AP62942 108 aaKnown RBP14.46□□□□□ -0.1
RTF1-201ENST00000389629 ADIGQ0VDE8 80 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 SH3D19Q5HYK7 790 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 BTBD8Q5XKL5 378 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 TAS2R42Q7RTR8 314 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 SLC41A1Q8IVJ1 513 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 FBXO16Q8IX29 292 aaPredicted RBP14.46□□□□□ -0.1
RTF1-201ENST00000389629 PHTF2Q8N3S3 785 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 CBR4Q8N4T8 237 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 AGBL3Q8NEM8 1001 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 CALML6Q8TD86 181 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 CCDC126Q96EE4 140 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 ZNF670Q9BS34 389 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 FICDQ9BVA6 458 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 SDCBP2Q9H190 292 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 LHX5Q9H2C1 402 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 PRDM12Q9H4Q4 367 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 LMCD1Q9NZU5 365 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 PIM2Q9P1W9 311 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 DSEQ9UL01 958 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 RIPK3Q9Y572 518 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 FADS3Q9Y5Q0 445 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 PAPSS1O43252 624 aaPredicted RBP14.46□□□□□ -0.1
RTF1-201ENST00000389629 HS6ST1O60243 411 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 HSMCR30P0CW71 290 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 ACO1P21399 889 aaKnown RBP14.46□□□□□ -0.1
RTF1-201ENST00000389629 UBA1P22314 1058 aaKnown RBP14.46□□□□□ -0.1
RTF1-201ENST00000389629 ATP6AP1LQ52LC2 224 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 PPM1LQ5SGD2 360 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 OSCP1Q8WVF1 389 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms