RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 KCNMB4Q86W47 210 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 PARP9Q8IXQ6 854 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 RAB3IPQ96QF0 476 aaPredicted RBP23.52■■□□□ 1.36
VPS16-201ENST00000380443 KCNK4Q9NYG8 393 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 MTMR11A4FU01 709 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 ATP9BO43861 1147 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 SNNO75324 88 aaPredicted RBP23.52■■□□□ 1.36
VPS16-201ENST00000380443 NEBLO76041 1014 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 MOCS2O96007 188 aaPredicted RBP23.52■■□□□ 1.36
VPS16-201ENST00000380443 DLDP09622 509 aaKnown RBP23.52■■□□□ 1.36
VPS16-201ENST00000380443 HAPLN1P10915 354 aaPredicted RBP23.52■■□□□ 1.36
VPS16-201ENST00000380443 GPR15P49685 360 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 RGS19P49795 217 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 PAPOLAP51003 745 aaKnown RBP23.52■■□□□ 1.36
VPS16-201ENST00000380443 RENBPP51606 427 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 USP46P62068 366 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 MPP3Q13368 585 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 CHI3L2Q15782 390 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 PKN3Q6P5Z2 889 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 STRA8Q7Z7C7 330 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 C14orf80Q86SX3 495 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 LCA5Q86VQ0 697 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 CRLF3Q8IUI8 442 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 CRIPAKQ8N1N5 446 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 ATAD1Q8NBU5 361 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 SHROOM3Q8TF72 1996 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 THOC1Q96FV9 657 aaKnown RBP23.52■■□□□ 1.36
VPS16-201ENST00000380443 THAP1Q9NVV9 213 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 RBM22Q9NW64 420 aaKnown RBP eCLIP23.52■■□□□ 1.36
VPS16-201ENST00000380443 IPO11Q9UI26 975 aaKnown RBP23.52■■□□□ 1.36
VPS16-201ENST00000380443 ZFP69BQ9UJL9 534 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 PSAT1Q9Y617 370 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 VWA8A3KMH1 1905 aa23.51■■□□□ 1.35
VPS16-201ENST00000380443 PLIN3O60664 434 aa23.51■■□□□ 1.35
VPS16-201ENST00000380443 DNAJB1P25685 340 aa23.51■■□□□ 1.35
VPS16-201ENST00000380443 OCRLQ01968 901 aa23.51■■□□□ 1.35
VPS16-201ENST00000380443 TNK2Q07912 1038 aa23.51■■□□□ 1.35
VPS16-201ENST00000380443 BST1Q10588 318 aa23.51■■□□□ 1.35
VPS16-201ENST00000380443 STX3Q13277 289 aa23.51■■□□□ 1.35
VPS16-201ENST00000380443 MS4A13Q5J8X5 152 aa23.51■■□□□ 1.35
VPS16-201ENST00000380443 SDHAF4Q5VUM1 108 aa23.51■■□□□ 1.35
VPS16-201ENST00000380443 CES3Q6UWW8 571 aa23.51■■□□□ 1.35
VPS16-201ENST00000380443 ARHGAP36Q6ZRI8 547 aa23.51■■□□□ 1.35
VPS16-201ENST00000380443 TBC1D1Q86TI0 1168 aaPredicted RBP23.51■■□□□ 1.35
VPS16-201ENST00000380443 SUGP1Q8IWZ8 645 aaKnown RBP23.51■■□□□ 1.35
VPS16-201ENST00000380443 TMEM237Q96Q45 408 aa23.51■■□□□ 1.35
VPS16-201ENST00000380443 C20orf96Q9NUD7 363 aaPredicted RBP23.51■■□□□ 1.35
VPS16-201ENST00000380443 IGLV3-27P01718 113 aa23.5■■□□□ 1.35
VPS16-201ENST00000380443 GALTP07902 379 aa23.5■■□□□ 1.35
VPS16-201ENST00000380443 ADRA1AP35348 466 aa23.5■■□□□ 1.35
VPS16-201ENST00000380443 EFEMP1Q12805 493 aa23.5■■□□□ 1.35
VPS16-201ENST00000380443 OLIG2Q13516 323 aa23.5■■□□□ 1.35
VPS16-201ENST00000380443 UGP2Q16851 508 aa23.5■■□□□ 1.35
VPS16-201ENST00000380443 FAM91A1Q658Y4 838 aa23.5■■□□□ 1.35
VPS16-201ENST00000380443 RFWD2Q8NHY2 731 aa23.5■■□□□ 1.35
VPS16-201ENST00000380443 USP33Q8TEY7 942 aa23.5■■□□□ 1.35
VPS16-201ENST00000380443 PGLYRP2Q96PD5 576 aa23.5■■□□□ 1.35
VPS16-201ENST00000380443 SLC25A51Q9H1U9 297 aa23.5■■□□□ 1.35
VPS16-201ENST00000380443 LRMDAQ9H2I8 198 aa23.5■■□□□ 1.35
VPS16-201ENST00000380443 MARCH2Q9P0N8 246 aa23.5■■□□□ 1.35
VPS16-201ENST00000380443 NUDT5Q9UKK9 219 aa23.5■■□□□ 1.35
VPS16-201ENST00000380443 DRGXA6NNA5 263 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 ZDHHC11BP0C7U3 371 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 OVGP1Q12889 678 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 N4BP2L1Q5TBK1 243 aaPredicted RBP23.49■■□□□ 1.35
VPS16-201ENST00000380443 NECAB2Q7Z6G3 386 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 PPHLN1Q8NEY8 458 aaKnown RBP23.49■■□□□ 1.35
VPS16-201ENST00000380443 MAGEC3Q8TD91 643 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 MFSD3Q96ES6 412 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 TTPALQ9BTX7 342 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 PRKD2Q9BZL6 878 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 KCNK13Q9HB14 408 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 CHRAC1Q9NRG0 131 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 VPS45Q9NRW7 570 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 DCTN4Q9UJW0 460 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 A0A0G2JND7 137 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 TRAFD1O14545 582 aaPredicted RBP23.49■■□□□ 1.35
VPS16-201ENST00000380443 GRK2P25098 689 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 TAF10Q12962 218 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 SNCBQ16143 134 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 MGAT5BQ3V5L5 792 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 FASTKD1Q53R41 847 aaKnown RBP23.49■■□□□ 1.35
VPS16-201ENST00000380443 HSP90AA5PQ58FG0 334 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 LRRC43Q8N309 656 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 DCLK2Q8N568 766 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 NSMCE1Q8WV22 266 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 MCMBPQ9BTE3 642 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 TTLL2Q9BWV7 592 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 TMEM120AQ9BXJ8 343 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 FAM96AQ9H5X1 160 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 SNX15Q9NRS6 342 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 MPP6Q9NZW5 540 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 MID2Q9UJV3 735 aa23.49■■□□□ 1.35
VPS16-201ENST00000380443 FNDC1Q4ZHG4 1894 aaPredicted RBP23.48■■□□□ 1.35
VPS16-201ENST00000380443 CXCL10P02778 98 aa23.48■■□□□ 1.35
VPS16-201ENST00000380443 HLA-DQB2P05538 268 aa23.48■■□□□ 1.35
VPS16-201ENST00000380443 PAMP19021 973 aa23.48■■□□□ 1.35
VPS16-201ENST00000380443 CLNKQ7Z7G1 428 aa23.48■■□□□ 1.35
VPS16-201ENST00000380443 CNTN4Q8IWV2 1026 aa23.48■■□□□ 1.35
VPS16-201ENST00000380443 PPP1R14CQ8TAE6 165 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms