RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 PIP4P1Q86T03 277 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 SPATS2Q86XZ4 545 aaKnown RBP4.78□□□□□ -1.64
C9orf72-203ENST00000380003 SFTPA2Q8IWL1 248 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 ELOA2Q8IYF1 753 aaPredicted RBP4.78□□□□□ -1.64
C9orf72-203ENST00000380003 TMEM35BQ8NCS4 154 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 ZCCHC14Q8WYQ9 949 aaKnown RBP4.78□□□□□ -1.64
C9orf72-203ENST00000380003 TTC17Q96AE7 1141 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 NAP1L5Q96NT1 182 aaPredicted RBP4.78□□□□□ -1.64
C9orf72-203ENST00000380003 MCEEQ96PE7 176 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 PSMB7Q99436 277 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.78□□□□□ -1.64
C9orf72-203ENST00000380003 ACE2Q9BYF1 805 aaPredicted RBP4.78□□□□□ -1.64
C9orf72-203ENST00000380003 GANQ9H2C0 597 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 PABPC3Q9H361 631 aaKnown RBP4.78□□□□□ -1.64
C9orf72-203ENST00000380003 FAM124BQ9H5Z6 455 aaPredicted RBP4.78□□□□□ -1.64
C9orf72-203ENST00000380003 ZDHHC6Q9H6R6 413 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 EVLQ9UI08 416 aaPredicted RBP4.78□□□□□ -1.64
C9orf72-203ENST00000380003 NOCTQ9UK39 431 aaKnown RBP4.78□□□□□ -1.64
C9orf72-203ENST00000380003 COQ6Q9Y2Z9 468 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 TENM4Q6N022 2769 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 RP1P56715 2156 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 PTPRQQ9UMZ3 2332 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 PLXNA2O75051 1894 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 CSMD1Q96PZ7 3565 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 TRPM6Q9BX84 2022 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 A0A1W2PPC4 97 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 A0A1W2PQU0 124 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 KRIT1O00522 736 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 RAD51BO15315 384 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 TIMM44O43615 452 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 RNASEH1O60930 286 aaKnown RBP4.78□□□□□ -1.64
C9orf72-203ENST00000380003 LRIG2O94898 1065 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 MOCS3O95396 460 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 ETFBP38117 255 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 NNMTP40261 264 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 C21orf59P57076 290 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 ARF5P84085 180 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 OGDHQ02218 1023 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 C1orf61Q13536 156 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 ELAVL3Q14576 367 aaKnown RBP4.78□□□□□ -1.64
C9orf72-203ENST00000380003 LLGL1Q15334 1064 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 SHBQ15464 509 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 SMTNL2Q2TAL5 461 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 MPP7Q5T2T1 576 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 AGBL4Q5VU57 503 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 WDR59Q6PJI9 974 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 SASS6Q6UVJ0 657 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 SLC26A9Q7LBE3 791 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 CEP76Q8TAP6 659 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 FAM172AQ8WUF8 416 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 GATA6Q92908 595 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 FAXDC2Q96IV6 333 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 LRIG1Q96JA1 1093 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 BTBD6Q96KE9 485 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 ATP13A1Q9HD20 1204 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 SLC12A6Q9UHW9 1150 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 TMEM59LQ9UK28 342 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 PCDHGC3Q9UN70 934 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 NCKAP1Q9Y2A7 1128 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 MFHAS1Q9Y4C4 1052 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 OR51B4Q9Y5P0 310 aa4.78□□□□□ -1.64
C9orf72-203ENST00000380003 ZNF462Q96JM2 2506 aa4.78□□□□□ -1.65
C9orf72-203ENST00000380003 SYCE3A1L190 88 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 PMS2P1A4D2B8 440 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 CD160O95971 181 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 UGT2B4P06133 528 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 CD27P26842 260 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 CD38P28907 300 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 PPP1R2P41236 205 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 COPB1P53618 953 aaKnown RBP4.77□□□□□ -1.65
C9orf72-203ENST00000380003 HDAC4P56524 1084 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 FGL2Q14314 439 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 NCAPHQ15003 741 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 CA9Q16790 459 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 SLC25A52Q3SY17 297 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 PEAR1Q5VY43 1037 aaPredicted RBP4.77□□□□□ -1.65
C9orf72-203ENST00000380003 KIAA0895LQ68EN5 471 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 ENOSF1Q7L5Y1 443 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 RD3Q7Z3Z2 195 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 LUZP1Q86V48 1076 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 CPNE8Q86YQ8 564 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 SH2D3CQ8N5H7 860 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 CADM4Q8NFZ8 388 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 STK32AQ8WU08 396 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 BAP1Q92560 729 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 ARRDC3Q96B67 414 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 SMIM14Q96QK8 99 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 WRAP53Q9BUR4 548 aaKnown RBP4.77□□□□□ -1.65
C9orf72-203ENST00000380003 STK33Q9BYT3 514 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 TCEAL2Q9H3H9 227 aaPredicted RBP4.77□□□□□ -1.65
C9orf72-203ENST00000380003 ADAM22Q9P0K1 906 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 KLF15Q9UIH9 416 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 PNMA8BQ9ULN7 279 aaPredicted RBP4.77□□□□□ -1.65
C9orf72-203ENST00000380003 PPM1HQ9ULR3 514 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 UTP20O75691 2785 aaKnown RBP4.77□□□□□ -1.65
C9orf72-203ENST00000380003 EDDM13A0A1B0GTR0 161 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 TRABD2BA6NFA1 517 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 NEMP1O14524 444 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 INSIG1O15503 277 aa4.77□□□□□ -1.65
C9orf72-203ENST00000380003 SART1O43290 800 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms