RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 NSMCE2Q96MF7 247 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 ACOT9Q9Y305 439 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 USP6P35125 1406 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 RIT2Q99578 217 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 GBA2Q9HCG7 927 aaPredicted RBP11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 MRPL17Q9NRX2 175 aaKnown RBP11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 TTC26A0AVF1 554 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 BTN3A2P78410 334 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 FCHO2Q0JRZ9 810 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 XKR4Q5GH76 650 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 MARC1Q5VT66 337 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 PTAR1Q7Z6K3 402 aaPredicted RBP11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 PHF10Q8WUB8 498 aaKnown RBP11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 CYP3A43Q9HB55 503 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 A1CFQ9NQ94 594 aaKnown RBP11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 A2ML1A8K2U0 1454 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 DGKAP23743 735 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 SLC26A2P50443 739 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 ITIH4Q14624 930 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 POU6F1Q14863 301 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 FSTL5Q8N475 847 aaPredicted RBP11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 LRRC46Q96FV0 321 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 OPTCQ9UBM4 332 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 SAMD4AQ9UPU9 718 aaKnown RBP11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 PIKFYVEQ9Y2I7 2098 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 FAM111AQ96PZ2 611 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 SHCBP1LQ9BZQ2 653 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 ZNF518BQ9C0D4 1074 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 MCCC2Q9HCC0 563 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 COPS7AQ9UBW8 275 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 TAF6LQ9Y6J9 622 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 TRPM1Q7Z4N2 1603 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 SCRN3Q0VDG4 424 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 BST2Q10589 180 aaKnown RBP11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 RHBGQ9H310 441 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 ING4Q9UNL4 249 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 MANSC4A6NHS7 340 aaPredicted RBP11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 CASP1P29466 404 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 C4orf46Q504U0 113 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 RASSF5Q8WWW0 418 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 TMEM79Q9BSE2 394 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 ZMYM5Q9UJ78 669 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 RIC1Q4ADV7 1423 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 NRKQ7Z2Y5 1582 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 CCDC182A6NF36 153 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 TSPAN9O75954 239 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 LSM12Q3MHD2 195 aaKnown RBP11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 C9orf72Q96LT7 481 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 CNTNAP2Q9UHC6 1331 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 IFNGP01579 166 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 ATXN1P54253 815 aaKnown RBP11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 EN1Q05925 392 aaPredicted RBP11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 PAPD7Q5XG87 772 aaKnown RBP11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 EFHD2Q96C19 240 aaPredicted RBP11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 C1orf50Q9BV19 199 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 PCDHGB5Q9Y5G0 923 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 CAPN15O75808 1086 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 RASGEF1BQ0VAM2 473 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 KCNMB4Q86W47 210 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 FAM126BQ8IXS8 530 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 MID1IP1Q9NPA3 183 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 CYP2F1P24903 491 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 FAM171A1Q5VUB5 890 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 C7orf25Q9BPX7 421 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 ZDHHC6Q9H6R6 413 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 C15orf38-AP3S2A0A0A6YYH1 394 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 SCN2BO60939 215 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 SERPINA4P29622 427 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 NAB1Q13506 487 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 ARPINQ7Z6K5 226 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 PHF21BQ96EK2 531 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 POLD4Q9HCU8 107 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 VPS45Q9NRW7 570 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 MTMR4Q9NYA4 1195 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 DMGDHQ9UI17 866 aaKnown RBP11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 GLS2Q9UI32 602 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 ITGA11Q9UKX5 1188 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 TLX3O43711 291 aaPredicted RBP11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 SEC22BO75396 215 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 LSM8O95777 96 aaKnown RBP11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 ADH1AP07327 375 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 ALDH3A2P51648 485 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 TKTL1P51854 596 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 ACSM2AQ08AH3 577 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 ACSM2BQ68CK6 577 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 ILDR2Q71H61 639 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 HCAR2Q8TDS4 363 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 ADAM33Q9BZ11 813 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 PRLRP16471 622 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 PGAM1P18669 254 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 MASP1P48740 699 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 FAM172AQ8WUF8 416 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 LRRC1Q9BTT6 524 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 PLEKHA1Q9HB21 404 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 BTBD7Q9P203 1132 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 H3BM21 787 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 GALCP54803 685 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 PABPC1LQ4VXU2 614 aaKnown RBP11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 SHOC2Q9UQ13 582 aa11.37□□□□□ -0.59
PTCHD1-201ENST00000379361 ATMINO43313 823 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms