RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 PDK1Q15118 436 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 TARBP2Q15633 366 aaKnown RBP8.34□□□□□ -1.07
PTPRR-203ENST00000378778 UGP2Q16851 508 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 ANO4Q32M45 955 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 ZBTB41Q5SVQ8 909 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 VWA5B1Q5TIE3 1220 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 ELMSAN1Q6PJG2 1045 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 MPZL3Q6UWV2 235 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 ZBTB49Q6ZSB9 765 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 PIWIL4Q7Z3Z4 852 aaKnown RBP8.34□□□□□ -1.07
PTPRR-203ENST00000378778 TMEM135Q86UB9 458 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 CLVS1Q8IUQ0 354 aaPredicted RBP8.34□□□□□ -1.07
PTPRR-203ENST00000378778 TTC30BQ8N4P2 665 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.34□□□□□ -1.07
PTPRR-203ENST00000378778 MTMR14Q8NCE2 650 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 URGCPQ8TCY9 931 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 MCMBPQ9BTE3 642 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 SLC25A23Q9BV35 468 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 RHOBTB2Q9BYZ6 727 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 TRPV6Q9H1D0 765 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 SPAG4Q9NPE6 437 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 ATAD3AQ9NVI7 634 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 CD300AQ9UGN4 299 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 ZNF711Q9Y462 761 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.34□□□□□ -1.07
PTPRR-203ENST00000378778 KAT6AQ92794 2004 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 A0A096LPK6 155 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 TMEM247A6NEH6 219 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 GOLGA8TH3BQL2 631 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 MTSS1O43312 755 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 LGR5O75473 907 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 NAA20P61599 178 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 TNFAIP2Q03169 654 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 SEPT6Q14141 434 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 INPP5AQ14642 412 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 TGFBIQ15582 683 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 IL23RQ5VWK5 629 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 FAM160B1Q5W0V3 765 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 ZNF772Q68DY9 489 aaPredicted RBP8.34□□□□□ -1.07
PTPRR-203ENST00000378778 OR6B2Q6IFH4 312 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 STYK1Q6J9G0 422 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 CASC4Q6P4E1 433 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 TTC33Q6PID6 262 aaPredicted RBP8.34□□□□□ -1.07
PTPRR-203ENST00000378778 KCNT2Q6UVM3 1135 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 EEPD1Q7L9B9 569 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 PELI3Q8N2H9 469 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 TBC1D15Q8TC07 691 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 MAPK15Q8TD08 544 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 STYXQ8WUJ0 223 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 SNRNP27Q8WVK2 155 aaKnown RBP8.34□□□□□ -1.07
PTPRR-203ENST00000378778 SEPT8Q92599 483 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 NRBF2Q96F24 287 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 CYP2S1Q96SQ9 504 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 RNPEPQ9H4A4 650 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 PFDN4Q9NQP4 134 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.34□□□□□ -1.07
PTPRR-203ENST00000378778 ZNF232Q9UNY5 417 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 PCDHGA7Q9Y5G6 932 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 FNDC1Q4ZHG4 1894 aaPredicted RBP8.34□□□□□ -1.07
PTPRR-203ENST00000378778 SULT1C4O75897 302 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 CDH3P22223 829 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 RPS3AP61247 264 aaKnown RBP8.33□□□□□ -1.08
PTPRR-203ENST00000378778 MTM1Q13496 603 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 MTMR2Q13614 643 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 CAPSQ13938 189 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 C8orf82Q6P1X6 216 aaPredicted RBP8.33□□□□□ -1.08
PTPRR-203ENST00000378778 FAM183BPQ6ZVS7 135 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 PDZD4Q76G19 769 aaPredicted RBP8.33□□□□□ -1.08
PTPRR-203ENST00000378778 HERC6Q8IVU3 1022 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 SIX6OS1Q8N1H7 587 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 NLGN1Q8N2Q7 840 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 COLGALT1Q8NBJ5 622 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 OR2T34Q8NGX1 318 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 OR2T3Q8NH03 318 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.33□□□□□ -1.08
PTPRR-203ENST00000378778 FEM1CQ96JP0 617 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 PRMT6Q96LA8 375 aaPredicted RBP8.33□□□□□ -1.08
PTPRR-203ENST00000378778 CGREF1Q99674 301 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 GPR22Q99680 433 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 HOPXQ9BPY8 73 aaPredicted RBP8.33□□□□□ -1.08
PTPRR-203ENST00000378778 NPLQ9BXD5 320 aaPredicted RBP8.33□□□□□ -1.08
PTPRR-203ENST00000378778 ACE2Q9BYF1 805 aaPredicted RBP8.33□□□□□ -1.08
PTPRR-203ENST00000378778 SHCBP1LQ9BZQ2 653 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 ASB7Q9H672 318 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 RPF2Q9H7B2 306 aaKnown RBP8.33□□□□□ -1.08
PTPRR-203ENST00000378778 DBNDD1Q9H9R9 158 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 CXorf21Q9HAI6 301 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 CCM2LQ9NUG4 571 aaPredicted RBP8.33□□□□□ -1.08
PTPRR-203ENST00000378778 DUS2Q9NX74 493 aaKnown RBP8.33□□□□□ -1.08
PTPRR-203ENST00000378778 GGA3Q9NZ52 723 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 BFARQ9NZS9 450 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 TMEM181Q9P2C4 612 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 ZNF70Q9UC06 446 aaPredicted RBP8.33□□□□□ -1.08
PTPRR-203ENST00000378778 TLK1Q9UKI8 766 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 HTR3EA5X5Y0 456 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 H0YAE9 185 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 FBP2O00757 339 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 GIPC1O14908 333 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 NCAM2O15394 837 aa8.33□□□□□ -1.08
PTPRR-203ENST00000378778 CFLARO15519 480 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms