RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 CRADDP78560 199 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 OLIG2Q13516 323 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 PDK4Q16654 411 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 ALFQ53S48 1182 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 RGS9BPQ6ZS82 235 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 KCNV2Q8TDN2 545 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 LRMDAQ9H2I8 198 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 MRPL17Q9NRX2 175 aaKnown RBP19.8■□□□□ 0.76
SSU72-204ENST00000378726 NKX1-2Q9UD57 310 aaPredicted RBP19.8■□□□□ 0.76
SSU72-204ENST00000378726 HBS1LQ9Y450 684 aaKnown RBP19.8■□□□□ 0.76
SSU72-204ENST00000378726 PCDHA11Q9Y5I1 949 aa19.8■□□□□ 0.76
SSU72-204ENST00000378726 IGLV3-10A0A075B6K4 115 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 EDF1O60869 148 aaKnown RBP19.79■□□□□ 0.76
SSU72-204ENST00000378726 WFS1O76024 890 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 GJB5O95377 273 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 MGAT1P26572 445 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 HECTD3Q5T447 861 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 OTOP3Q7RTS5 596 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 LRRC49Q8IUZ0 686 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 UMODL1-AS1Q8N2C9 162 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 OR52K1Q8NGK4 314 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 SLC44A1Q8WWI5 657 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 LRRC37BQ96QE4 947 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 NOL6Q9H6R4 1146 aaKnown RBP19.79■□□□□ 0.76
SSU72-204ENST00000378726 TMEM248Q9NWD8 314 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 TRPM5Q9NZQ8 1165 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 FNIP2Q9P278 1114 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 YIPF1Q9Y548 306 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 PCDHB12Q9Y5F1 795 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 DRGXA6NNA5 263 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 PRRG1O14668 218 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 USP12O75317 370 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 C1QAP02745 245 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 INHBAP08476 426 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 CA4P22748 312 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 PRKCHP24723 683 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 ACBD5Q5T8D3 534 aaPredicted RBP19.79■□□□□ 0.76
SSU72-204ENST00000378726 KCTD11Q693B1 232 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 CTAGE3PQ8IX95 158 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.79■□□□□ 0.76
SSU72-204ENST00000378726 PPM1NQ8N819 430 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 GSDMBQ8TAX9 411 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 ARNTL2Q8WYA1 636 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 MYRFLQ96LU7 910 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 RPRD1AQ96P16 312 aaPredicted RBP19.79■□□□□ 0.76
SSU72-204ENST00000378726 MLPHQ9BV36 600 aaPredicted RBP19.79■□□□□ 0.76
SSU72-204ENST00000378726 SENP1Q9P0U3 644 aa19.79■□□□□ 0.76
SSU72-204ENST00000378726 IPO11Q9UI26 975 aaKnown RBP19.79■□□□□ 0.76
SSU72-204ENST00000378726 SMG5Q9UPR3 1016 aaKnown RBP19.79■□□□□ 0.76
SSU72-204ENST00000378726 CCDC189A1A4V9 331 aa19.78■□□□□ 0.76
SSU72-204ENST00000378726 ERI2A8K979 691 aaKnown RBP19.78■□□□□ 0.76
SSU72-204ENST00000378726 T-ENOLP0DO92 83 aa19.78■□□□□ 0.76
SSU72-204ENST00000378726 NDST2P52849 883 aa19.78■□□□□ 0.76
SSU72-204ENST00000378726 SLC18A1P54219 525 aa19.78■□□□□ 0.76
SSU72-204ENST00000378726 PRPSAP1Q14558 356 aa19.78■□□□□ 0.76
SSU72-204ENST00000378726 TIGD7Q6NT04 549 aaPredicted RBP19.78■□□□□ 0.76
SSU72-204ENST00000378726 LRRC6Q86X45 466 aa19.78■□□□□ 0.76
SSU72-204ENST00000378726 LRRC8CQ8TDW0 803 aa19.78■□□□□ 0.76
SSU72-204ENST00000378726 C10orf82Q8WW14 230 aa19.78■□□□□ 0.76
SSU72-204ENST00000378726 IL12RB2Q99665 862 aa19.78■□□□□ 0.76
SSU72-204ENST00000378726 UBP1Q9NZI7 540 aa19.78■□□□□ 0.76
SSU72-204ENST00000378726 CXorf49A8MYA2 514 aaPredicted RBP19.78■□□□□ 0.76
SSU72-204ENST00000378726 TYROBPO43914 113 aa19.78■□□□□ 0.76
SSU72-204ENST00000378726 ATP5HO75947 161 aa19.78■□□□□ 0.76
SSU72-204ENST00000378726 FGBP02675 491 aa19.78■□□□□ 0.76
SSU72-204ENST00000378726 PPM1AP35813 382 aa19.78■□□□□ 0.76
SSU72-204ENST00000378726 MTA1Q13330 715 aa19.78■□□□□ 0.76
SSU72-204ENST00000378726 NADSYN1Q6IA69 706 aa19.78■□□□□ 0.76
SSU72-204ENST00000378726 TRMT10BQ6PF06 316 aaKnown RBP19.78■□□□□ 0.76
SSU72-204ENST00000378726 CHSY1Q86X52 802 aa19.78■□□□□ 0.76
SSU72-204ENST00000378726 COCHO43405 550 aa19.77■□□□□ 0.76
SSU72-204ENST00000378726 CACNG3O60359 315 aa19.77■□□□□ 0.76
SSU72-204ENST00000378726 TWF1Q12792 350 aa19.77■□□□□ 0.76
SSU72-204ENST00000378726 VEPH1Q14D04 833 aa19.77■□□□□ 0.76
SSU72-204ENST00000378726 DNAJB7Q7Z6W7 309 aaPredicted RBP19.77■□□□□ 0.76
SSU72-204ENST00000378726 SLC26A11Q86WA9 606 aa19.77■□□□□ 0.76
SSU72-204ENST00000378726 CCNJLQ8IV13 435 aa19.77■□□□□ 0.76
SSU72-204ENST00000378726 DNAAF3Q8N9W5 541 aa19.77■□□□□ 0.76
SSU72-204ENST00000378726 SLC7A6OSQ96CW6 309 aaPredicted RBP19.77■□□□□ 0.76
SSU72-204ENST00000378726 SMYD2Q9NRG4 433 aa19.77■□□□□ 0.76
SSU72-204ENST00000378726 RBM22Q9NW64 420 aaKnown RBP eCLIP19.77■□□□□ 0.76
SSU72-204ENST00000378726 SHROOM3Q8TF72 1996 aa19.77■□□□□ 0.76
SSU72-204ENST00000378726 IQANK1A0A1B0GTG1 560 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 TEX28O15482 410 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 FGF18O76093 207 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 TACR2P21452 398 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 CCNG1P51959 295 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 PLD1Q13393 1074 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 ZNF449Q6P9G9 518 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 KLHDC10Q6PID8 442 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 EP400NLQ6ZTU2 488 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 TCEAL8Q8IYN2 117 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 MZB1Q8WU39 189 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 OXNAD1Q96HP4 312 aaPredicted RBP19.76■□□□□ 0.75
SSU72-204ENST00000378726 NAT9Q9BTE0 207 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 CASS4Q9NQ75 786 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 BATF3Q9NR55 127 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 SYBUQ9NX95 663 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 MOCS1Q9NZB8 636 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 LILRB3O75022 631 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms