RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 DUSP10Q9Y6W6 482 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 GUCY1B2O75343 617 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 MATN4O95460 622 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 CYP4F2P78329 520 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 CYP4F3Q08477 520 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 USP41Q3LFD5 358 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 GPR158Q5T848 1215 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 N4BP2L1Q5TBK1 243 aaPredicted RBP14.3□□□□□ -0.12
TRIM13-202ENST00000378182 AGBL2Q5U5Z8 902 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 NANOGNBQ7Z5D8 188 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 RTL3Q8N8U3 475 aaKnown RBP14.3□□□□□ -0.12
TRIM13-202ENST00000378182 MKNK1Q9BUB5 465 aa14.3□□□□□ -0.12
TRIM13-202ENST00000378182 MYO3AQ8NEV4 1616 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 TM9SF1O15321 606 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 PPP1R37O75864 691 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 ADSLP30566 484 aaPredicted RBP14.29□□□□□ -0.12
TRIM13-202ENST00000378182 FOXM1Q08050 763 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 XKR6Q5GH73 641 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 TAF2Q6P1X5 1199 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 SCUBE1Q8IWY4 988 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 SUGP1Q8IWZ8 645 aaKnown RBP14.29□□□□□ -0.12
TRIM13-202ENST00000378182 OR14C36Q8NHC7 312 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 SETD6Q8TBK2 473 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 SLC12A4Q9UP95 1085 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 CXCL11O14625 94 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 ZCCHC18P0CG32 403 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 Q4G0T1 1027 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 LMLNQ96KR4 655 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 RNF145Q96MT1 663 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 CYP3A43Q9HB55 503 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 MAGI3Q5TCQ9 1506 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 ERAL1O75616 437 aaKnown RBP14.29□□□□□ -0.12
TRIM13-202ENST00000378182 ADH1CP00326 375 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 C4BPBP20851 252 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 SRP54P61011 504 aaKnown RBP14.29□□□□□ -0.12
TRIM13-202ENST00000378182 PPATQ06203 517 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 SF1Q15637 639 aaKnown RBP14.29□□□□□ -0.12
TRIM13-202ENST00000378182 CPA6Q8N4T0 437 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 SELENOMQ8WWX9 145 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 NDNQ99608 321 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 ROPN1BQ9BZX4 212 aaPredicted RBP14.29□□□□□ -0.12
TRIM13-202ENST00000378182 ROPN1Q9HAT0 212 aaPredicted RBP14.29□□□□□ -0.12
TRIM13-202ENST00000378182 PLK2Q9NYY3 685 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 C1orf232A0A0U1RR37 186 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 LRATO95237 230 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 APODP05090 189 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 IL6P05231 212 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 MASP1P48740 699 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 CREMQ03060 361 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 KLHL12Q53G59 568 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 HYIQ5T013 277 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 PPP2R2DQ66LE6 453 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 NPNTQ6UXI9 565 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 CHKBQ9Y259 395 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 TRPM1Q7Z4N2 1603 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 EFCAB10A6NFE3 127 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 CENPXA8MT69 81 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 PRODHO43272 600 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 VIL1P09327 827 aaKnown RBP14.29□□□□□ -0.12
TRIM13-202ENST00000378182 SEC24CP53992 1094 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 RASA2Q15283 850 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 PLEKHA7Q6IQ23 1121 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 RNF148Q8N7C7 305 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 OR52L1Q8NGH7 329 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 ZBTB10Q96DT7 871 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 IDI2Q9BXS1 227 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 NDUFAF1Q9Y375 327 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 FAM25EA8MYX2 175 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 CACNB4O00305 520 aaPredicted RBP14.29□□□□□ -0.12
TRIM13-202ENST00000378182 RNASEH2AO75792 299 aaKnown RBP14.29□□□□□ -0.12
TRIM13-202ENST00000378182 HMGCRP04035 888 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 UAP1L1Q3KQV9 507 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 GPR142Q7Z601 462 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 HTR3CQ8WXA8 447 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 OR8D1Q8WZ84 308 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 SMPDL3BQ92485 455 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 GTF3C4Q9UKN8 822 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 PSME2Q9UL46 239 aa14.29□□□□□ -0.12
TRIM13-202ENST00000378182 PTPRJQ12913 1337 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 C1orf167Q5SNV9 1468 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 PTPN1P18031 435 aaKnown RBP14.28□□□□□ -0.12
TRIM13-202ENST00000378182 S100A3P33764 101 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 ANTXR2P58335 489 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 CYP2R1Q6VVX0 501 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 RTFDC1Q9BY42 306 aaPredicted RBP14.28□□□□□ -0.12
TRIM13-202ENST00000378182 NMRAL1Q9HBL8 299 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 RHBDL2Q9NX52 303 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 DLGAP2Q9P1A6 1054 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 STK39Q9UEW8 545 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 SLC27A6Q9Y2P4 619 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 CFIP05156 583 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 NR2F1P10589 423 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 PIK3R1P27986 724 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 CDH17Q12864 832 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 ARHGEF19Q8IW93 802 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 DAW1Q8N136 415 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 ANKS1AQ92625 1134 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 EPB41L4BQ9H329 900 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 PPCSQ9HAB8 311 aa14.28□□□□□ -0.12
TRIM13-202ENST00000378182 PPP1R3GB7ZBB8 358 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms