RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 CATSPER2Q96P56 530 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 PTPN18Q99952 460 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 S100A14Q9HCY8 104 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 DNAJC28Q9NX36 388 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 PCDHB12Q9Y5F1 795 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 CDY2AQ9Y6F7 541 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 CDY1Q9Y6F8 540 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 PLXNB2O15031 1838 aa16.54■□□□□ 0.24
TRIM27-202ENST00000377199 TMEM233B4DJY2 109 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 PIGNO95427 931 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 JUNP05412 331 aaKnown RBP16.53■□□□□ 0.24
TRIM27-202ENST00000377199 BRCC3P46736 316 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 CACNB2Q08289 660 aaPredicted RBP16.53■□□□□ 0.24
TRIM27-202ENST00000377199 CCNIQ14094 377 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 GRAMD1BQ3KR37 738 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 NOMO2Q5JPE7 1267 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 CNTD1Q8N815 330 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 TSC22D3Q99576 134 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 SLC2A6Q9UGQ3 507 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 SFMBT1Q9UHJ3 866 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 ADAMTS6Q9UKP5 1117 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 POMPQ9Y244 141 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 B3GAT3O94766 335 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 ARSAP15289 507 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 RAG1P15918 1043 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 AXLP30530 894 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 HARS2P49590 506 aaKnown RBP16.53■□□□□ 0.24
TRIM27-202ENST00000377199 POLE2P56282 527 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 KLF10Q13118 480 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 INSCQ1MX18 579 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 ARL13AQ5H913 290 aaPredicted RBP16.53■□□□□ 0.24
TRIM27-202ENST00000377199 STXBP5Q5T5C0 1151 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 SMYD5Q6GMV2 418 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 RPS27LQ71UM5 84 aaKnown RBP16.53■□□□□ 0.24
TRIM27-202ENST00000377199 ZNF467Q7Z7K2 595 aaPredicted RBP16.53■□□□□ 0.24
TRIM27-202ENST00000377199 SDCCAG8Q86SQ7 713 aaPredicted RBP16.53■□□□□ 0.24
TRIM27-202ENST00000377199 SNX32Q86XE0 403 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 SPDYE1Q8NFV5 336 aaPredicted RBP16.53■□□□□ 0.24
TRIM27-202ENST00000377199 SREK1Q8WXA9 508 aaKnown RBP16.53■□□□□ 0.24
TRIM27-202ENST00000377199 TMEM209Q96SK2 561 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 C1orf21Q9H246 121 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 CASS4Q9NQ75 786 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 THP07101 528 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 PKNOX1P55347 436 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 CDC42EP1Q00587 391 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 KCTD13Q8WZ19 329 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 MYLPFQ96A32 169 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 PPP1R10Q96QC0 940 aaKnown RBP16.53■□□□□ 0.24
TRIM27-202ENST00000377199 TUBGCP5Q96RT8 1024 aa16.53■□□□□ 0.24
TRIM27-202ENST00000377199 ENO3P13929 434 aaPredicted RBP16.52■□□□□ 0.24
TRIM27-202ENST00000377199 ITPRIPL1Q6GPH6 555 aa16.52■□□□□ 0.24
TRIM27-202ENST00000377199 ESRP1Q6NXG1 681 aaKnown RBP16.52■□□□□ 0.24
TRIM27-202ENST00000377199 DHDDSQ86SQ9 333 aa16.52■□□□□ 0.24
TRIM27-202ENST00000377199 FICDQ9BVA6 458 aa16.52■□□□□ 0.24
TRIM27-202ENST00000377199 ILKAPQ9H0C8 392 aaPredicted RBP16.52■□□□□ 0.24
TRIM27-202ENST00000377199 NDFIP2Q9NV92 336 aa16.52■□□□□ 0.24
TRIM27-202ENST00000377199 GNEQ9Y223 722 aaKnown RBP16.52■□□□□ 0.24
TRIM27-202ENST00000377199 AHSGP02765 367 aa16.52■□□□□ 0.23
TRIM27-202ENST00000377199 HOXD8P13378 290 aaPredicted RBP16.52■□□□□ 0.23
TRIM27-202ENST00000377199 CHRNA4P43681 627 aa16.52■□□□□ 0.23
TRIM27-202ENST00000377199 CRYBB1P53674 252 aaPredicted RBP16.52■□□□□ 0.23
TRIM27-202ENST00000377199 AQP4P55087 323 aa16.52■□□□□ 0.23
TRIM27-202ENST00000377199 CDH17Q12864 832 aa16.52■□□□□ 0.23
TRIM27-202ENST00000377199 NAB1Q13506 487 aa16.52■□□□□ 0.23
TRIM27-202ENST00000377199 SFT2D3Q587I9 215 aa16.52■□□□□ 0.23
TRIM27-202ENST00000377199 ZNF419Q96HQ0 510 aaPredicted RBP16.52■□□□□ 0.23
TRIM27-202ENST00000377199 TEKT5Q96M29 485 aa16.52■□□□□ 0.23
TRIM27-202ENST00000377199 CYP4F12Q9HCS2 524 aa16.52■□□□□ 0.23
TRIM27-202ENST00000377199 XPR1Q9UBH6 696 aa16.52■□□□□ 0.23
TRIM27-202ENST00000377199 ARHGAP26Q9UNA1 814 aa16.52■□□□□ 0.23
TRIM27-202ENST00000377199 ST3GAL5Q9UNP4 418 aa16.52■□□□□ 0.23
TRIM27-202ENST00000377199 SORCS3Q9UPU3 1222 aa16.52■□□□□ 0.23
TRIM27-202ENST00000377199 NEMP2A6NFY4 417 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 F8W810 466 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 GABRDO14764 452 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 TIMM44O43615 452 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 PSEN1P49768 467 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 PRPSAP1Q14558 356 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 TIGD5Q53EQ6 642 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 EPGNQ6UW88 154 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 SNX31Q8N9S9 440 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 GDPD5Q8WTR4 605 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 SIKE1Q9BRV8 207 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 IL22Q9GZX6 179 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 AP5M1Q9H0R1 490 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 CNGB3Q9NQW8 809 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 MPP6Q9NZW5 540 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 ZDHHC2Q9UIJ5 367 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 MAGEA13PA6NCF6 341 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 STX16-NPEPL1H3BU86 382 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 GNAT1P11488 350 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 PLK1P53350 603 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 SEMA3BQ13214 749 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 CNGA3Q16281 694 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 LSM12Q3MHD2 195 aaKnown RBP16.51■□□□□ 0.23
TRIM27-202ENST00000377199 FSCBQ5H9T9 825 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 KCTD11Q693B1 232 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 ZNF354CQ86Y25 554 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 FSTL5Q8N475 847 aaPredicted RBP16.51■□□□□ 0.23
TRIM27-202ENST00000377199 GTF3C2Q8WUA4 911 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms