RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 GBA3Q9H227 469 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 WDR6Q9NNW5 1121 aaKnown RBP13.46□□□□□ -0.25
ACTN1-202ENST00000376839 GDAP2Q9NXN4 497 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 UBAP1Q9NZ09 502 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 PRPF19Q9UMS4 504 aaKnown RBP13.46□□□□□ -0.25
ACTN1-202ENST00000376839 GPR32O75388 356 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 NPR3P17342 541 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 RPL14P50914 215 aaKnown RBP13.45□□□□□ -0.26
ACTN1-202ENST00000376839 TPI1P60174 286 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 CEACAM7Q14002 265 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 PIGGQ5H8A4 983 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 LIPMQ5VYY2 423 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 NOTUMQ6P988 496 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 ZYG11AQ6WRX3 759 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 BNC2Q6ZN30 1099 aaPredicted RBP13.45□□□□□ -0.26
ACTN1-202ENST00000376839 KCTD4Q8WVF5 259 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 SREK1Q8WXA9 508 aaKnown RBP13.45□□□□□ -0.26
ACTN1-202ENST00000376839 HNRNPABQ99729 332 aaKnown RBP13.45□□□□□ -0.26
ACTN1-202ENST00000376839 APBA2Q99767 749 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 ZNF385DQ9H6B1 395 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 LRRC4Q9HBW1 653 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 C6orf203Q9P0P8 240 aaPredicted RBP13.45□□□□□ -0.26
ACTN1-202ENST00000376839 SHROOM3Q8TF72 1996 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 DNAJA2O60884 412 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 ENO3P13929 434 aaPredicted RBP13.45□□□□□ -0.26
ACTN1-202ENST00000376839 TFEBP19484 476 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 PMLP29590 882 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 IREB2P48200 963 aaKnown RBP13.45□□□□□ -0.26
ACTN1-202ENST00000376839 TAF6P49848 677 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 CSRP3P50461 194 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 CSE1LP55060 971 aaKnown RBP13.45□□□□□ -0.26
ACTN1-202ENST00000376839 MAP3K7CLP57077 242 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 SEMA3BQ13214 749 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 CYLC2Q14093 348 aaPredicted RBP13.45□□□□□ -0.26
ACTN1-202ENST00000376839 FLOT2Q14254 428 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 FRG1Q14331 258 aaKnown RBP13.45□□□□□ -0.26
ACTN1-202ENST00000376839 GK3PQ14409 553 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 ZNF460Q14592 562 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 C16orf89Q6UX73 402 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 CLEC20AQ6ZU45 233 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 SPNS2Q8IVW8 549 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 LILRA2Q8N149 483 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 SIX6OS1Q8N1H7 587 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 TNIP3Q96KP6 325 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 UNKQ9C0B0 810 aaKnown RBP13.45□□□□□ -0.26
ACTN1-202ENST00000376839 SLC4A7Q9Y6M7 1214 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 TSC2P49815 1807 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 YJEFN3A6XGL0 299 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 H2AFYO75367 372 aaKnown RBP13.45□□□□□ -0.26
ACTN1-202ENST00000376839 GABRB3P28472 473 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 TKTL1P51854 596 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 NSUN2Q08J23 767 aaKnown RBP eCLIP13.45□□□□□ -0.26
ACTN1-202ENST00000376839 PDCD2Q16342 344 aaPredicted RBP13.45□□□□□ -0.26
ACTN1-202ENST00000376839 ANO4Q32M45 955 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 NXNQ6DKJ4 435 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 LIMS2Q7Z4I7 341 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 ZC3HC1Q86WB0 502 aaKnown RBP13.45□□□□□ -0.26
ACTN1-202ENST00000376839 LSMEM2Q8N112 164 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 GPC2Q8N158 579 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 SCYL1Q96KG9 808 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 ZNF560Q96MR9 790 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 GPR22Q99680 433 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 ULBP1Q9BZM6 244 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 COPS7BQ9H9Q2 264 aaPredicted RBP13.45□□□□□ -0.26
ACTN1-202ENST00000376839 CLIC5Q9NZA1 410 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 RIMS3Q9UJD0 308 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 COMMD3-BMI1R4GMX3 469 aa13.45□□□□□ -0.26
ACTN1-202ENST00000376839 TMEM233B4DJY2 109 aa13.44□□□□□ -0.26
ACTN1-202ENST00000376839 AP1G1O43747 822 aa13.44□□□□□ -0.26
ACTN1-202ENST00000376839 HUS1O60921 280 aa13.44□□□□□ -0.26
ACTN1-202ENST00000376839 CD4P01730 458 aa13.44□□□□□ -0.26
ACTN1-202ENST00000376839 SLC35E2BP0CK96 405 aa13.44□□□□□ -0.26
ACTN1-202ENST00000376839 PPARGP37231 505 aaPredicted RBP13.44□□□□□ -0.26
ACTN1-202ENST00000376839 RPL26P61254 145 aaKnown RBP13.44□□□□□ -0.26
ACTN1-202ENST00000376839 DYNC1I2Q13409 638 aaKnown RBP13.44□□□□□ -0.26
ACTN1-202ENST00000376839 LSAMPQ13449 338 aa13.44□□□□□ -0.26
ACTN1-202ENST00000376839 ADGRE1Q14246 886 aa13.44□□□□□ -0.26
ACTN1-202ENST00000376839 USP10Q14694 798 aaKnown RBP13.44□□□□□ -0.26
ACTN1-202ENST00000376839 CNGA3Q16281 694 aa13.44□□□□□ -0.26
ACTN1-202ENST00000376839 ZNF792Q3KQV3 632 aa13.44□□□□□ -0.26
ACTN1-202ENST00000376839 KIAA0319Q5VV43 1072 aa13.44□□□□□ -0.26
ACTN1-202ENST00000376839 SLC41A1Q8IVJ1 513 aa13.44□□□□□ -0.26
ACTN1-202ENST00000376839 SPATA6LQ8N4H0 392 aa13.44□□□□□ -0.26
ACTN1-202ENST00000376839 MARVELD2Q8N4S9 558 aa13.44□□□□□ -0.26
ACTN1-202ENST00000376839 RP9Q8TA86 221 aaKnown RBP13.44□□□□□ -0.26
ACTN1-202ENST00000376839 SERPINI1Q99574 410 aa13.44□□□□□ -0.26
ACTN1-202ENST00000376839 KATNBL1Q9H079 304 aa13.44□□□□□ -0.26
ACTN1-202ENST00000376839 OCEL1Q9H607 264 aa13.44□□□□□ -0.26
ACTN1-202ENST00000376839 CACNG4Q9UBN1 327 aa13.44□□□□□ -0.26
ACTN1-202ENST00000376839 KCNH4Q9UQ05 1017 aa13.44□□□□□ -0.26
ACTN1-202ENST00000376839 MYOCOSA0A1B0GUC4 107 aa13.44□□□□□ -0.26
ACTN1-202ENST00000376839 CRTAMO95727 393 aa13.44□□□□□ -0.26
ACTN1-202ENST00000376839 LILRA4P59901 499 aa13.44□□□□□ -0.26
ACTN1-202ENST00000376839 GPRIN1Q7Z2K8 1008 aa13.44□□□□□ -0.26
ACTN1-202ENST00000376839 CENPLQ8N0S6 344 aaPredicted RBP13.44□□□□□ -0.26
ACTN1-202ENST00000376839 FSTL5Q8N475 847 aaPredicted RBP13.44□□□□□ -0.26
ACTN1-202ENST00000376839 BHLHE22Q8NFJ8 381 aaPredicted RBP13.44□□□□□ -0.26
ACTN1-202ENST00000376839 TMEM40Q8WWA1 233 aa13.44□□□□□ -0.26
ACTN1-202ENST00000376839 EMID1Q96A84 441 aaPredicted RBP13.44□□□□□ -0.26
ACTN1-202ENST00000376839 NMD3Q96D46 503 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms