RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 SLC2A3P11169 496 aa20.58■□□□□ 0.88
VSX1-202ENST00000376709 SELPP16109 830 aa20.58■□□□□ 0.88
VSX1-202ENST00000376709 ABCG1P45844 678 aa20.58■□□□□ 0.88
VSX1-202ENST00000376709 C14orf80Q86SX3 495 aa20.58■□□□□ 0.88
VSX1-202ENST00000376709 ARHGAP18Q8N392 663 aa20.58■□□□□ 0.88
VSX1-202ENST00000376709 NSL1Q96IY1 281 aa20.58■□□□□ 0.88
VSX1-202ENST00000376709 ZNF778Q96MU6 729 aa20.58■□□□□ 0.88
VSX1-202ENST00000376709 NMUR2Q9GZQ4 415 aa20.58■□□□□ 0.88
VSX1-202ENST00000376709 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.58■□□□□ 0.88
VSX1-202ENST00000376709 BPTFQ12830 3046 aa20.57■□□□□ 0.88
VSX1-202ENST00000376709 CCDC22O60826 627 aa20.57■□□□□ 0.88
VSX1-202ENST00000376709 NBNO60934 754 aa20.57■□□□□ 0.88
VSX1-202ENST00000376709 MYCP01106 439 aaPredicted RBP20.57■□□□□ 0.88
VSX1-202ENST00000376709 FGF3P11487 239 aaPredicted RBP20.57■□□□□ 0.88
VSX1-202ENST00000376709 MAP2K2P36507 400 aa20.57■□□□□ 0.88
VSX1-202ENST00000376709 GMPRP36959 345 aa20.57■□□□□ 0.88
VSX1-202ENST00000376709 MLLT6P55198 1093 aaPredicted RBP20.57■□□□□ 0.88
VSX1-202ENST00000376709 USP46P62068 366 aa20.57■□□□□ 0.88
VSX1-202ENST00000376709 FAM171A1Q5VUB5 890 aa20.57■□□□□ 0.88
VSX1-202ENST00000376709 C10orf107Q8IVU9 208 aa20.57■□□□□ 0.88
VSX1-202ENST00000376709 GPR152Q8TDT2 470 aa20.57■□□□□ 0.88
VSX1-202ENST00000376709 ISL2Q96A47 359 aa20.57■□□□□ 0.88
VSX1-202ENST00000376709 KIFC1Q9BW19 673 aa20.57■□□□□ 0.88
VSX1-202ENST00000376709 FSD1LQ9BXM9 530 aa20.57■□□□□ 0.88
VSX1-202ENST00000376709 CAB39LQ9H9S4 337 aa20.57■□□□□ 0.88
VSX1-202ENST00000376709 RBM22Q9NW64 420 aaKnown RBP eCLIP20.57■□□□□ 0.88
VSX1-202ENST00000376709 TMEM161AQ9NX61 479 aa20.57■□□□□ 0.88
VSX1-202ENST00000376709 GMIPQ9P107 970 aa20.57■□□□□ 0.88
VSX1-202ENST00000376709 COPG2Q9UBF2 871 aa20.57■□□□□ 0.88
VSX1-202ENST00000376709 VWA8A3KMH1 1905 aa20.57■□□□□ 0.88
VSX1-202ENST00000376709 PLXNA3P51805 1871 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 MAGEA12P43365 314 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 SLC1A6P48664 564 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 PAPOLAP51003 745 aaKnown RBP20.56■□□□□ 0.88
VSX1-202ENST00000376709 GEMP55040 296 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 CSE1LP55060 971 aaKnown RBP20.56■□□□□ 0.88
VSX1-202ENST00000376709 ARPP19P56211 112 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 TBX4P57082 545 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 HTRA3P83110 453 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 POU6F1Q14863 301 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 CCDC153Q494R4 210 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 WLSQ5T9L3 541 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 PIK3R6Q5UE93 754 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 PDPK2PQ6A1A2 396 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 KLHDC8BQ8IXV7 354 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 ATAD1Q8NBU5 361 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 PTCD3Q96EY7 689 aaKnown RBP20.56■□□□□ 0.88
VSX1-202ENST00000376709 C1orf74Q96LT6 269 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 PPP1R2P1Q96PQ5 205 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 FICDQ9BVA6 458 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.56■□□□□ 0.88
VSX1-202ENST00000376709 ZNF358Q9NW07 568 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 ARMCX1Q9P291 453 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 A0A096LPK6 155 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 LYPLA1O75608 230 aaPredicted RBP20.56■□□□□ 0.88
VSX1-202ENST00000376709 HLA-DQB2P05538 268 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 CALB2P22676 271 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 NRG1Q02297 640 aaPredicted RBP20.56■□□□□ 0.88
VSX1-202ENST00000376709 CDK18Q07002 472 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 EFEMP1Q12805 493 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 GPNMBQ14956 572 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 PCID2Q5JVF3 399 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 ARTNQ5T4W7 220 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 MSANTD2Q6P1R3 559 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 WDR75Q8IWA0 830 aaKnown RBP20.56■□□□□ 0.88
VSX1-202ENST00000376709 TTC9BQ8N6N2 239 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 B3GALT6Q96L58 329 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 RILPQ96NA2 401 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 NSMCE4AQ9NXX6 385 aa20.56■□□□□ 0.88
VSX1-202ENST00000376709 PPARGC1AQ9UBK2 798 aaKnown RBP20.56■□□□□ 0.88
VSX1-202ENST00000376709 ITM2AO43736 263 aa20.55■□□□□ 0.88
VSX1-202ENST00000376709 PMPCBO75439 489 aa20.55■□□□□ 0.88
VSX1-202ENST00000376709 SERPINE1P05121 402 aa20.55■□□□□ 0.88
VSX1-202ENST00000376709 MPOP05164 745 aa20.55■□□□□ 0.88
VSX1-202ENST00000376709 ESRRAP11474 423 aaPredicted RBP20.55■□□□□ 0.88
VSX1-202ENST00000376709 EZRP15311 586 aaKnown RBP20.55■□□□□ 0.88
VSX1-202ENST00000376709 GATMP50440 423 aa20.55■□□□□ 0.88
VSX1-202ENST00000376709 KRT72Q14CN4 511 aa20.55■□□□□ 0.88
VSX1-202ENST00000376709 ANO4Q32M45 955 aa20.55■□□□□ 0.88
VSX1-202ENST00000376709 ZNF280DQ6N043 979 aa20.55■□□□□ 0.88
VSX1-202ENST00000376709 TFAP2DQ7Z6R9 452 aa20.55■□□□□ 0.88
VSX1-202ENST00000376709 LRRC49Q8IUZ0 686 aa20.55■□□□□ 0.88
VSX1-202ENST00000376709 DBF4BQ8NFT6 615 aa20.55■□□□□ 0.88
VSX1-202ENST00000376709 PIWIL2Q8TC59 973 aaKnown RBP20.55■□□□□ 0.88
VSX1-202ENST00000376709 PPP4R1Q8TF05 950 aa20.55■□□□□ 0.88
VSX1-202ENST00000376709 VPS39Q96JC1 886 aa20.55■□□□□ 0.88
VSX1-202ENST00000376709 PRKCGP05129 697 aa20.55■□□□□ 0.88
VSX1-202ENST00000376709 CCND1P24385 295 aa20.55■□□□□ 0.88
VSX1-202ENST00000376709 GRK2P25098 689 aa20.55■□□□□ 0.88
VSX1-202ENST00000376709 CDK7P50613 346 aa20.55■□□□□ 0.88
VSX1-202ENST00000376709 DLG2Q15700 870 aa20.55■□□□□ 0.88
VSX1-202ENST00000376709 HSF5Q4G112 596 aaPredicted RBP20.55■□□□□ 0.88
VSX1-202ENST00000376709 AFMIDQ63HM1 303 aa20.55■□□□□ 0.88
VSX1-202ENST00000376709 PKN3Q6P5Z2 889 aa20.55■□□□□ 0.88
VSX1-202ENST00000376709 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.55■□□□□ 0.88
VSX1-202ENST00000376709 PPHLN1Q8NEY8 458 aaKnown RBP20.55■□□□□ 0.88
VSX1-202ENST00000376709 SLC39A13Q96H72 371 aa20.55■□□□□ 0.88
VSX1-202ENST00000376709 BTBD10Q9BSF8 475 aa20.55■□□□□ 0.88
VSX1-202ENST00000376709 IPO11Q9UI26 975 aaKnown RBP20.55■□□□□ 0.88
VSX1-202ENST00000376709 DNAJC16Q9Y2G8 782 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms