RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 OTUD3Q5T2D3 398 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 FAM219BQ5XKK7 198 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ESRP1Q6NXG1 681 aaKnown RBP14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ZBTB49Q6ZSB9 765 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ACVR1CQ8NER5 493 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CDC26Q8NHZ8 85 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 WNT8BQ93098 351 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 KLHL5Q96PQ7 755 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 NAT9Q9BTE0 207 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 MMADHCQ9H3L0 296 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 SP110Q9HB58 689 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 MAST2Q6P0Q8 1798 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 HDAC3O15379 428 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 BAIAP3O94812 1187 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 C22orf31O95567 290 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 PTPN1P18031 435 aaKnown RBP14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CSE1LP55060 971 aaKnown RBP14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 MTX3Q5HYI7 312 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 GPRC5AQ8NFJ5 357 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 FCRL3Q96P31 734 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ALG9Q9H6U8 611 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 PIGVQ9NUD9 493 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 SLX4Q8IY92 1834 aa14.62□□□□□ -0.07
TNFRSF1B-201ENST00000376259 A0A088AWK7 358 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 A6NHS1 94 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ZBTB14O43829 449 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 BEST1O76090 585 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CD4P01730 458 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CNTFP26441 200 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 KCTD21Q4G0X4 260 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 MBLAC2Q68D91 279 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ERO1BQ86YB8 467 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 NT5DC4Q86YG4 428 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 MFN1Q8IWA4 741 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ANKRD13AQ8IZ07 590 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 EFHBQ8N7U6 833 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 RMDN1Q96DB5 314 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CNTN6Q9UQ52 1028 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 GNEQ9Y223 722 aaKnown RBP14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 SMIM28A0A1B0GU29 152 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 FAM159BA6NKW6 160 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 BIRC5O15392 142 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 PARNO95453 639 aaKnown RBP14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 PAMP19021 973 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ICAM3P32942 547 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 FASTKQ14296 549 aaKnown RBP14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 SV2CQ496J9 727 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 C6orf10Q5SRN2 563 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 C9orf57Q5W0N0 161 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 HBEGFQ99075 208 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 BCO2Q9BYV7 579 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 GIMAP2Q9UG22 337 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 NUP205Q92621 2012 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ABCA3Q99758 1704 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 GNGT2O14610 69 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ANGPT2O15123 496 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 UBDO15205 165 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 TIPRLO75663 272 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CCDC166P0CW27 439 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 GRIA3P42263 894 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 GRIK3Q13003 919 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 PLPPR4Q7Z2D5 763 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 METTL23Q86XA0 190 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 GPRC5DQ9NZD1 345 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 NCKIPSDQ9NZQ3 722 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ZNF180Q9UJW8 692 aa14.61□□□□□ -0.07
TNFRSF1B-201ENST00000376259 MYBPHLA2RUH7 354 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ONECUT3O60422 494 aaPredicted RBP14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CKMT2P17540 419 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 PRKCHP24723 683 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 LBRQ14739 615 aaKnown RBP14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 TAF12Q16514 161 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CES4AQ5XG92 561 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 NAPRTQ6XQN6 538 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 OR9I1Q8NGQ6 314 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 SENP8Q96LD8 212 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 QKIQ96PU8 341 aaKnown RBP eCLIP14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 BTRCQ9Y297 605 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 RGSL1A5PLK6 1076 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 TRAFD1O14545 582 aaPredicted RBP14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ADCY6O43306 1168 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 GCATO75600 419 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 NPR3P17342 541 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CCR1P32246 355 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 NOS2P35228 1153 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ADRA1BP35368 520 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CDH17Q12864 832 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CCDC153Q494R4 210 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 SGO1Q5FBB7 561 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 SLC9A4Q6AI14 798 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 LRRC8BQ6P9F7 803 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ARHGAP22Q7Z5H3 698 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 FSTL5Q8N475 847 aaPredicted RBP14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 MZB1Q8WU39 189 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ADNPQ9H2P0 1102 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CYLDQ9NQC7 956 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 FAM50BQ9Y247 325 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CCL15-CCL14A0A0B4J2E2 113 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 TCRBV5S1A1TA0A578 114 aa14.6□□□□□ -0.07
TNFRSF1B-201ENST00000376259 NRP1O14786 923 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms