RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 FAM159BA6NKW6 160 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 GRM6O15303 877 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 CPP00450 1065 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 CDH17Q12864 832 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 LONRF1Q17RB8 773 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 PRSS36Q5K4E3 855 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 SPANXN3Q5MJ09 141 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 MARC1Q5VT66 337 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 ANKMY2Q8IV38 441 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 FBF1Q8TES7 1133 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 SLC44A1Q8WWI5 657 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 XPO6Q96QU8 1125 aaKnown RBP11.33□□□□□ -0.6
PDPN-202ENST00000376057 CDCA3Q99618 268 aaPredicted RBP11.33□□□□□ -0.6
PDPN-202ENST00000376057 IL22Q9GZX6 179 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 GKN1Q9NS71 199 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 RBM22Q9NW64 420 aaKnown RBP eCLIP11.33□□□□□ -0.6
PDPN-202ENST00000376057 ATG2AQ2TAZ0 1938 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.32□□□□□ -0.6
PDPN-202ENST00000376057 FAM237BA0A1B0GVD1 139 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 TCRBV9S1A1TA0A576 114 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 AVILO75366 819 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 EPOP01588 193 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 MAGOHP61326 146 aaKnown RBP11.32□□□□□ -0.6
PDPN-202ENST00000376057 ZNF177Q13360 481 aaPredicted RBP11.32□□□□□ -0.6
PDPN-202ENST00000376057 RALGPS1Q5JS13 557 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 UNC5AQ6ZN44 842 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 TMEM135Q86UB9 458 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 HS6ST3Q8IZP7 471 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 ARL14EPQ8N8R7 260 aaPredicted RBP11.32□□□□□ -0.6
PDPN-202ENST00000376057 SPOCK2Q92563 424 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 OXNAD1Q96HP4 312 aaPredicted RBP11.32□□□□□ -0.6
PDPN-202ENST00000376057 AGAP3Q96P47 875 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 RANBP9Q96S59 729 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 TASP1Q9H6P5 420 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 MAN1C1Q9NR34 630 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 CHMP2BQ9UQN3 213 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 CPQQ9Y646 472 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 SHROOM3Q8TF72 1996 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 MOSPD3O75425 235 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 HLA-DQB2P05538 268 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 SPATA31D3P0C874 917 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 HOXD9P28356 352 aaPredicted RBP11.32□□□□□ -0.6
PDPN-202ENST00000376057 SSTR1P30872 391 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 ARHGAP15Q53QZ3 475 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 TXNDC8Q6A555 127 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 KDELC1Q6UW63 502 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 RANBP10Q6VN20 620 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 SPATA31D4Q6ZUB0 917 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 DEPDC1BQ8WUY9 529 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 DCAKDQ8WVC6 231 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 ZNF419Q96HQ0 510 aaPredicted RBP11.32□□□□□ -0.6
PDPN-202ENST00000376057 PRKD2Q9BZL6 878 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 SP110Q9HB58 689 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 BFARQ9NZS9 450 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 NUP205Q92621 2012 aa11.32□□□□□ -0.6
PDPN-202ENST00000376057 NUP210Q8TEM1 1887 aaPredicted RBP11.32□□□□□ -0.6
PDPN-202ENST00000376057 ZNF197O14709 1029 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 BANF1O75531 89 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 USP1O94782 785 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 ARHGEF15O94989 841 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 CNTFP26441 200 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 MAGEA10P43363 369 aaPredicted RBP11.31□□□□□ -0.6
PDPN-202ENST00000376057 PLK1P53350 603 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 GPM6BQ13491 265 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 KCNC3Q14003 757 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 LBRQ14739 615 aaKnown RBP11.31□□□□□ -0.6
PDPN-202ENST00000376057 SHHQ15465 462 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 RAB30Q15771 203 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 C9orf50Q5SZB4 431 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 KCTD16Q68DU8 428 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 CXorf57Q6NSI4 855 aaKnown RBP11.31□□□□□ -0.6
PDPN-202ENST00000376057 POTEHQ6S545 545 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 TFAP2DQ7Z6R9 452 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 EXOC3L1Q86VI1 746 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 ZNF557Q8N988 423 aaPredicted RBP11.31□□□□□ -0.6
PDPN-202ENST00000376057 NETO2Q8NC67 525 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 SHKBP1Q8TBC3 707 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 SLC22A12Q96S37 553 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 TBL1YQ9BQ87 522 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 KIFC1Q9BW19 673 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 DNMT3BQ9UBC3 853 aaKnown RBP11.31□□□□□ -0.6
PDPN-202ENST00000376057 PRKAG3Q9UGI9 489 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 OR51B4Q9Y5P0 310 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 TYW5A2RUC4 315 aaKnown RBP11.31□□□□□ -0.6
PDPN-202ENST00000376057 GRIA1P42261 906 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 ZXDBP98169 803 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 SLC12A1Q13621 1099 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 MPPE1Q53F39 396 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 INO80DQ53TQ3 878 aaPredicted RBP11.31□□□□□ -0.6
PDPN-202ENST00000376057 METTL3Q86U44 580 aaKnown RBP11.31□□□□□ -0.6
PDPN-202ENST00000376057 BBS5Q8N3I7 341 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 SH2D3CQ8N5H7 860 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 MZB1Q8WU39 189 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 WBP2Q969T9 261 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 MGME1Q9BQP7 344 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 SLC46A2Q9BY10 475 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 ATXN3LQ9H3M9 355 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 SOX13Q9UN79 622 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 FAM169AQ9Y6X4 670 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms