RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 EBF1Q9UH73 591 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 ABT1Q9ULW3 272 aaKnown RBP13.16□□□□□ -0.3
MSH5-204ENST00000375755 PIN4Q9Y237 131 aaKnown RBP13.16□□□□□ -0.3
MSH5-204ENST00000375755 MBLAC1A4D2B0 266 aaPredicted RBP13.16□□□□□ -0.3
MSH5-204ENST00000375755 MEIS3P2A8K0S8 358 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 CFLARO15519 480 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 CILPO75339 1184 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 MAP3K6O95382 1288 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 ERBB2P04626 1255 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 HARS2P49590 506 aaKnown RBP13.16□□□□□ -0.3
MSH5-204ENST00000375755 NDST1P52848 882 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 CDH15P55291 814 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 EPGNQ6UW88 154 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 CPNE9Q8IYJ1 553 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 ABHD8Q96I13 439 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 PIWIL1Q96J94 861 aaKnown RBP13.16□□□□□ -0.3
MSH5-204ENST00000375755 ADPGKQ9BRR6 497 aa13.16□□□□□ -0.3
MSH5-204ENST00000375755 GLRA3O75311 464 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 DGKIO75912 1065 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 H6PDO95479 791 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 DARSP14868 501 aaKnown RBP13.15□□□□□ -0.3
MSH5-204ENST00000375755 GRK2P25098 689 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 PIK3R1P27986 724 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 CTBSQ01459 385 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 SNX17Q15036 470 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 FSCN1Q16658 493 aaKnown RBP13.15□□□□□ -0.3
MSH5-204ENST00000375755 MGAT5BQ3V5L5 792 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 ZNF618Q5T7W0 954 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 CXCL17Q6UXB2 119 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 ZNF534Q76KX8 674 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 KYQ8NBH2 561 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 ARRDC4Q8NCT1 418 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 TRIB2Q92519 343 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 HEXIM2Q96MH2 286 aaKnown RBP13.15□□□□□ -0.3
MSH5-204ENST00000375755 CORO1BQ9BR76 489 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 ASB7Q9H672 318 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 RRN3P2A6NIE6 340 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 H3BNH8 94 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 TMX2-CTNND1H3BSU7 103 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 STX16-NPEPL1H3BU86 382 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 HAS3O00219 553 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 RECQL4O94761 1208 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 MICAL2O94851 1124 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 ALDH2P05091 517 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 RALBP11234 206 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 RBL1P28749 1068 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 GRM5P41594 1212 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 DPP6P42658 865 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 NUP107P57740 925 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 TXNL4AP83876 142 aaKnown RBP13.15□□□□□ -0.3
MSH5-204ENST00000375755 PURAQ00577 322 aaKnown RBP13.15□□□□□ -0.3
MSH5-204ENST00000375755 PDCD4Q53EL6 469 aaKnown RBP13.15□□□□□ -0.3
MSH5-204ENST00000375755 SLC15A3Q8IY34 581 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 ZNF781Q8N8C0 355 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 DQX1Q8TE96 717 aaKnown RBP13.15□□□□□ -0.3
MSH5-204ENST00000375755 PEBP4Q96S96 227 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 EBNA1BP2Q99848 306 aaKnown RBP13.15□□□□□ -0.3
MSH5-204ENST00000375755 DCUN1D5Q9BTE7 237 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 FRMD8Q9BZ67 464 aaPredicted RBP13.15□□□□□ -0.3
MSH5-204ENST00000375755 NUF2Q9BZD4 464 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 TMEM216Q9P0N5 145 aa13.15□□□□□ -0.3
MSH5-204ENST00000375755 SMIM35A0A1B0GVV1 85 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 E2F8A0AVK6 867 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 ARHGEF37A1IGU5 675 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 TRUB2O95900 331 aaKnown RBP13.14□□□□□ -0.31
MSH5-204ENST00000375755 ZBED1O96006 694 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 HOXD12P35452 270 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 GRIA1P42261 906 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 CD151P48509 253 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 SLC5A3P53794 718 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 PTPN11Q06124 597 aaPredicted RBP13.14□□□□□ -0.31
MSH5-204ENST00000375755 PPM1JQ5JR12 505 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 SLC27A1Q6PCB7 646 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 C16orf89Q6UX73 402 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 PGBD4Q96DM1 585 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 TMEM176AQ96HP8 235 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 VPS50Q96JG6 964 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 COX4I2Q96KJ9 171 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 APBA2Q99767 749 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 ZNF518BQ9C0D4 1074 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 AP5M1Q9H0R1 490 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 RSAD1Q9HA92 442 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 OLAHQ9NV23 265 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 ZNF358Q9NW07 568 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 COPG2Q9UBF2 871 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 SNX9Q9Y5X1 595 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 GOLGA8QA0A0J9YX86 632 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 GOLGA8OA6NCC3 632 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 GOLGA8NF8WBI6 632 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 P4HA1P13674 534 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 GLDCP23378 1020 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 CDH5P33151 784 aaPredicted RBP13.14□□□□□ -0.31
MSH5-204ENST00000375755 HALP42357 657 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 AFF1P51825 1210 aaKnown RBP13.14□□□□□ -0.31
MSH5-204ENST00000375755 PSMC1P62191 440 aaKnown RBP13.14□□□□□ -0.31
MSH5-204ENST00000375755 CARM1Q86X55 608 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 CLVS1Q8IUQ0 354 aaPredicted RBP13.14□□□□□ -0.31
MSH5-204ENST00000375755 AGR3Q8TD06 166 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 PDCD6IPQ8WUM4 868 aaKnown RBP13.14□□□□□ -0.31
MSH5-204ENST00000375755 EME1Q96AY2 570 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms