RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 PET117Q6UWS5 81 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 TRAPPC11Q7Z392 1133 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 PPP1R2P1Q96PQ5 205 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 TREX2Q9BQ50 279 aaPredicted RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 RBM42Q9BTD8 480 aaKnown RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 TRPV4Q9HBA0 871 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 C3orf14Q9HBI5 128 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 IFT46Q9NQC8 304 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 METTL5Q9NRN9 209 aaKnown RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 MORF4L1Q9UBU8 362 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 SIX4Q9UIU6 781 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 IRGMA1A4Y4 181 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 ZBTB11O95625 1053 aaPredicted RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 SCGB1D1O95968 90 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 RHOP08100 348 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 SLC1A1P43005 524 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 HTR3AP46098 478 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 SP4Q02446 784 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 GTF2H3Q13889 308 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 ZNF460Q14592 562 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 LCN1P1Q5VSP4 162 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 RAP1GAP2Q684P5 730 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 OR13C9Q8NGT0 318 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 FAR2Q96K12 515 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 ENY2Q9NPA8 101 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 CCDC61Q9Y6R9 512 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 MYOFQ9NZM1 2061 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 A0A096LPI6 279 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 FCHO1O14526 889 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 USP12O75317 370 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 HIST1H2ABP04908 130 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 C8AP07357 584 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 NPEPPSP55786 919 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 RPL23AP62750 156 aaKnown RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 RBL2Q08999 1139 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 ABCA11PQ4W5N1 156 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 STRIP1Q5VSL9 837 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 PRAMEF17Q5VTA0 474 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 RPL7L1Q6DKI1 246 aaKnown RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 HIST3H2AQ7L7L0 130 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 THAP6Q8TBB0 222 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 HIST1H2ACQ93077 130 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 TEFMQ96QE5 360 aaKnown RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 POLR1EQ9GZS1 481 aaKnown RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 OPA3Q9H6K4 179 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 ARHGEF10LQ9HCE6 1279 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 GPAMQ9HCL2 828 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 RRAGDQ9NQL2 400 aaPredicted RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 KCMF1Q9P0J7 381 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 CCNE1P24864 410 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 ELOAQ14241 798 aaKnown RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 GNA13Q14344 377 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 CDK10Q15131 360 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 EXOC3L2Q2M3D2 409 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 ERI1Q8IV48 349 aaKnown RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 SCUBE1Q8IWY4 988 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 PDZD9Q8IXQ8 264 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 NIPA2Q8N8Q9 360 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 STK32AQ8WU08 396 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 HDAC10Q969S8 669 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 TMEM237Q96Q45 408 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 MCMBPQ9BTE3 642 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 PBDC1Q9BVG4 233 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 RYDENQ9NUL5 291 aaKnown RBP6.04□□□□□ -1.44
SCN2A-202ENST00000375427 DNAJC28Q9NX36 388 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 PCDHB4Q9Y5E5 795 aa6.04□□□□□ -1.44
SCN2A-202ENST00000375427 ZDHHC11BP0C7U3 371 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 RPL35P42766 123 aaKnown RBP6.03□□□□□ -1.44
SCN2A-202ENST00000375427 ALDH3B2P48448 385 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 TGM4P49221 684 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 IL2P60568 153 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 PON3Q15166 354 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 ZMAT1Q5H9K5 638 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 OR52L1Q8NGH7 329 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 AGR3Q8TD06 166 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 SMPDL3BQ92485 455 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 NDRG1Q92597 394 aaKnown RBP6.03□□□□□ -1.44
SCN2A-202ENST00000375427 HTRA1Q92743 480 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 SNAPC3Q92966 411 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 DNTTIP1Q9H147 329 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 CBX8Q9HC52 389 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 PRDM8Q9NQV8 689 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 CLN6Q9NWW5 311 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 POLHQ9Y253 713 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 MAB21L2Q9Y586 359 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 SCN3AQ9NY46 2000 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 OTOL1A6NHN0 477 aaPredicted RBP6.03□□□□□ -1.44
SCN2A-202ENST00000375427 E2F3O00716 465 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 SCGB1A1P11684 91 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 IREB2P48200 963 aaKnown RBP6.03□□□□□ -1.44
SCN2A-202ENST00000375427 TLE2Q04725 743 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 SULT2A1Q06520 285 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 MINDY4Q4G0A6 757 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 TIGD2Q4W5G0 525 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 KRBOX4Q5JUW0 171 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 CYB5D1Q6P9G0 228 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 ADGRD2Q7Z7M1 963 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 AMIGO1Q86WK6 493 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 SLITRK4Q8IW52 837 aa6.03□□□□□ -1.44
SCN2A-202ENST00000375427 THNSL1Q8IYQ7 743 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms