RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 DR1Q01658 176 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 ZNF423Q2M1K9 1284 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 PLEKHG4Q58EX7 1191 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 PPP1R2P3Q6NXS1 205 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 ARSKQ6UWY0 536 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 VSTM1Q6UX27 236 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 DET1Q7L5Y6 550 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 RASGRP2Q7LDG7 609 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 SLC16A9Q7RTY1 509 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 OR5T1Q8NG75 326 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 SMARCD2Q92925 531 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 TRIM43Q96BQ3 446 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-202ENST00000375405 MED15Q96RN5 788 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 FAM96AQ9H5X1 160 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 WASF3Q9UPY6 502 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 A6NHS1 94 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 ARHGEF33A8MVX0 844 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 BRINP1O60477 761 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 TULP3O75386 442 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 ITGA4P13612 1032 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 MXI1P50539 228 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 PPP2CBP62714 309 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 DPYSL2Q16555 572 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 MTHFSDQ2M296 383 aaKnown RBP4.7□□□□□ -1.66
SCN1A-202ENST00000375405 FAM83HQ6ZRV2 1179 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-202ENST00000375405 LONP2Q86WA8 852 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 CMTR2Q8IYT2 770 aaKnown RBP4.7□□□□□ -1.66
SCN1A-202ENST00000375405 C7orf61Q8IZ16 206 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 GALNT11Q8NCW6 608 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 TMEM237Q96Q45 408 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 P2RX7Q99572 595 aaKnown RBP4.7□□□□□ -1.66
SCN1A-202ENST00000375405 FAM213AQ9BRX8 229 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 ZNF649Q9BS31 505 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 C2orf40Q9H1Z8 148 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 GLOD4Q9HC38 313 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 CCDC61Q9Y6R9 512 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 SNRNP200O75643 2136 aaKnown RBP4.7□□□□□ -1.66
SCN1A-202ENST00000375405 LOC100506127A0A0U1RQW1 187 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 hCG_1807616A0A1W2PRN6 198 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 PMPCBO75439 489 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 TFPTP0C1Z6 253 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 BTDP43251 543 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 GNASQ5JWF2 1037 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 ANKRD26P1Q6NSI1 321 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 FBXL19Q6PCT2 694 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 PRSS58Q8IYP2 241 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 EMC1Q8N766 993 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 SEPT1Q8WYJ6 367 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 RNF25Q96BH1 459 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-202ENST00000375405 SEPHS2Q99611 448 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 TXN2Q99757 166 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 ADAM33Q9BZ11 813 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 ZNF518BQ9C0D4 1074 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 USP29Q9HBJ7 922 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 GMIPQ9P107 970 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 NDRG2Q9UN36 371 aaKnown RBP4.7□□□□□ -1.66
SCN1A-202ENST00000375405 IBTKQ9P2D0 1353 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-202ENST00000375405 RAB19A4D1S5 217 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 WASLO00401 505 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-202ENST00000375405 CITO14578 2027 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 CTIFO43310 598 aaKnown RBP4.7□□□□□ -1.66
SCN1A-202ENST00000375405 PHF2O75151 1096 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 STK17BO94768 372 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 VNN2O95498 520 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 ZNF35P13682 527 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 CMA1P23946 247 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 MAPK1P28482 360 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 ADD2P35612 726 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 CYP4F2P78329 520 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 CYP4F3Q08477 520 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 LRRC41Q15345 812 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 WDR59Q6PJI9 974 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 TPGS1Q6ZTW0 290 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 PODNQ7Z5L7 613 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 CAND1Q86VP6 1230 aaKnown RBP4.7□□□□□ -1.66
SCN1A-202ENST00000375405 TIGD4Q8IY51 512 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 TNS4Q8IZW8 715 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 MEIOBQ8N635 442 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 SPERTQ8NA61 448 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 FAM13CQ8NE31 585 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 GLT1D1Q96MS3 346 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 HINT2Q9BX68 163 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 ZNF700Q9H0M5 742 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 GNB4Q9HAV0 340 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 IL20RAQ9UHF4 553 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 IKZF2Q9UKS7 526 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 ARHGEF11O15085 1522 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 ASXL1Q8IXJ9 1541 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 ANKRD36BQ8N2N9 1353 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 F5H5T6 163 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 GPAA1O43292 621 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 SOAT2O75908 522 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 UBOX5O94941 541 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 MAGEA8P43361 318 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 LCP2Q13094 533 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 ATAD3CQ5T2N8 411 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 SMIM15Q7Z3B0 74 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 JAZF1Q86VZ6 243 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 ANKMY2Q8IV38 441 aa4.7□□□□□ -1.66
SCN1A-202ENST00000375405 PSD4Q8NDX1 1056 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms