RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 PHOX2BQ99453 314 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 NECTIN3Q9NQS3 549 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 PLEKHA8P1O95397 391 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 PIGNO95427 931 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 NR2F6P10588 404 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 PLA2G4EQ3MJ16 856 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 FBXO30Q8TB52 745 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 PNO1Q9NRX1 252 aaKnown RBP6.71□□□□□ -1.34
UBR4-204ENST00000375254 ANKEF1Q9NU02 776 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 ETNK2Q9NVF9 386 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 TNPO3Q9Y5L0 923 aaKnown RBP6.71□□□□□ -1.34
UBR4-204ENST00000375254 KANTRA0A1W2PQU2 76 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 BGNP21810 368 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 FGL1Q08830 312 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 DGCR6Q14129 220 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 IDNKQ5T6J7 187 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 ZNF276Q8N554 614 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 GANCQ8TET4 914 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 JPH3Q8WXH2 748 aaPredicted RBP6.71□□□□□ -1.34
UBR4-204ENST00000375254 ZNF436Q9C0F3 470 aaPredicted RBP6.71□□□□□ -1.34
UBR4-204ENST00000375254 PPP4R1LQ9P1A2 415 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 PCDHGA4Q9Y5G9 962 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 FRMPD4Q14CM0 1322 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 A0A087X0B3 334 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 DCXO43602 365 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 AGTR1P30556 359 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 FEN1P39748 380 aaKnown RBP6.71□□□□□ -1.34
UBR4-204ENST00000375254 MAZP56270 477 aaKnown RBP6.71□□□□□ -1.34
UBR4-204ENST00000375254 SPOCK1Q08629 439 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 PTPRNQ16849 979 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 CERCAMQ5T4B2 595 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 ZNF572Q7Z3I7 529 aaPredicted RBP6.71□□□□□ -1.34
UBR4-204ENST00000375254 SNX20Q7Z614 316 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 HDDC3Q8N4P3 179 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 LPCAT1Q8NF37 534 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 ZNF416Q9BWM5 594 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 CELF4Q9BZC1 486 aaKnown RBP6.71□□□□□ -1.34
UBR4-204ENST00000375254 DSN1Q9H410 356 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 C8orf33Q9H7E9 229 aaPredicted RBP6.71□□□□□ -1.34
UBR4-204ENST00000375254 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.71□□□□□ -1.34
UBR4-204ENST00000375254 SNX8Q9Y5X2 465 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 CYP26A1O43174 497 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 TPST1O60507 370 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 ABCG1P45844 678 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 KRT33BQ14525 404 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 NFE2Q16621 373 aaPredicted RBP6.71□□□□□ -1.34
UBR4-204ENST00000375254 KDELC2Q7Z4H8 507 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 PGAM4Q8N0Y7 254 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 KDM1BQ8NB78 822 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 OR2T34Q8NGX1 318 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 OR2T3Q8NH03 318 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 SLC39A10Q9ULF5 831 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 PCDHA3Q9Y5H8 950 aa6.71□□□□□ -1.34
UBR4-204ENST00000375254 RAD54L2Q9Y4B4 1467 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 HMGCRP04035 888 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 RALAP11233 206 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 NCS1P62166 190 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 GRSF1Q12849 480 aaKnown RBP eCLIP6.7□□□□□ -1.34
UBR4-204ENST00000375254 FAM189A2Q15884 450 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 C9orf43Q8TAL5 461 aaPredicted RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 SLC22A8Q8TCC7 542 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 C17orf75Q9HAS0 396 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 NMRAL1Q9HBL8 299 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 CNOT11Q9UKZ1 510 aaKnown RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 ATP6AP2A0A1C7CYW4 349 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 LINGO3P0C6S8 592 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 MTHFD1P11586 935 aaKnown RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 UBXN11Q5T124 520 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 PLA2G4FQ68DD2 849 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 ARSKQ6UWY0 536 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 PIWIL4Q7Z3Z4 852 aaKnown RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 TRPM4Q8TD43 1214 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 SUCLG2Q96I99 432 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 PAFAH2Q99487 392 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 ZNF577Q9BSK1 485 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 PKLRP30613 574 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 PTGER2P43116 358 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 TMEM44Q2T9K0 475 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 FAM153CQ494X1 144 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 CLYBLQ8N0X4 340 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 CST11Q9H112 138 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 LRRC19Q9H756 370 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 HSPB11Q9Y547 144 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 PMF1-BGLAPU3KQ54 211 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 MRASO14807 208 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 SLC30A4O14863 429 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 EDF1O60869 148 aaKnown RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 OR6B1O95007 311 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 CHRNGP07510 517 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 RPL4P36578 427 aaKnown RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 RPS9P46781 194 aaKnown RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 SAPCD2Q86UD0 394 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 TNFAIP8L1Q8WVP5 186 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 DCUN1D1Q96GG9 259 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 RIT2Q99578 217 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 FARP1Q9Y4F1 1045 aaPredicted RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 GRIA2P42262 883 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 GUCA1AP43080 201 aaPredicted RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 ZRANB3Q5FWF4 1079 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 TFB1MQ8WVM0 346 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms