RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 NELFEP18615 380 aaKnown RBP11.3□□□□□ -0.6
CCDC40-203ENST00000374877 PROZP22891 400 aa11.3□□□□□ -0.6
CCDC40-203ENST00000374877 GLDCP23378 1020 aa11.3□□□□□ -0.6
CCDC40-203ENST00000374877 SLC5A2P31639 672 aa11.3□□□□□ -0.6
CCDC40-203ENST00000374877 NR2C2P49116 596 aa11.3□□□□□ -0.6
CCDC40-203ENST00000374877 SERPINB8P50452 374 aa11.3□□□□□ -0.6
CCDC40-203ENST00000374877 ADARP55265 1226 aaKnown RBP11.3□□□□□ -0.6
CCDC40-203ENST00000374877 PRKCZQ05513 592 aa11.3□□□□□ -0.6
CCDC40-203ENST00000374877 PPP2R5DQ14738 602 aa11.3□□□□□ -0.6
CCDC40-203ENST00000374877 ACOT1Q86TX2 421 aa11.3□□□□□ -0.6
CCDC40-203ENST00000374877 LINC01465Q8N7H1 131 aa11.3□□□□□ -0.6
CCDC40-203ENST00000374877 DDI1Q8WTU0 396 aa11.3□□□□□ -0.6
CCDC40-203ENST00000374877 TRIB2Q92519 343 aa11.3□□□□□ -0.6
CCDC40-203ENST00000374877 KCTD15Q96SI1 283 aaPredicted RBP11.3□□□□□ -0.6
CCDC40-203ENST00000374877 GATA5Q9BWX5 397 aaPredicted RBP11.3□□□□□ -0.6
CCDC40-203ENST00000374877 SLC4A5Q9BY07 1137 aa11.3□□□□□ -0.6
CCDC40-203ENST00000374877 MINDY3Q9H8M7 445 aa11.3□□□□□ -0.6
CCDC40-203ENST00000374877 WDR41Q9HAD4 459 aa11.3□□□□□ -0.6
CCDC40-203ENST00000374877 CASP8AP2Q9UKL3 1982 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 RRN3P2A6NIE6 340 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 PAPSS1O43252 624 aaPredicted RBP11.29□□□□□ -0.6
CCDC40-203ENST00000374877 TRMUO75648 421 aaKnown RBP11.29□□□□□ -0.6
CCDC40-203ENST00000374877 F2P00734 622 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 INSRRP14616 1297 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 CLCN3P51790 818 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 NR1H2P55055 460 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 ARHGEF6Q15052 776 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 DPYSL2Q16555 572 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 PIGGQ5H8A4 983 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 SEL1L3Q68CR1 1132 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 NCBP2-AS2Q69YL0 99 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 PTAR1Q7Z6K3 402 aaPredicted RBP11.29□□□□□ -0.6
CCDC40-203ENST00000374877 TRIML2Q8N7C3 387 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 ZSCAN18Q8TBC5 510 aaPredicted RBP11.29□□□□□ -0.6
CCDC40-203ENST00000374877 CLEC4CQ8WTT0 213 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 PDCD6IPQ8WUM4 868 aaKnown RBP11.29□□□□□ -0.6
CCDC40-203ENST00000374877 KBTBD7Q8WVZ9 684 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 NLRP7Q8WX94 980 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 EME1Q96AY2 570 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 AGAP2Q99490 1192 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 CPNE1Q99829 537 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 UPF3AQ9H1J1 476 aaKnown RBP11.29□□□□□ -0.6
CCDC40-203ENST00000374877 PLK2Q9NYY3 685 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 SRRDQ9UH36 339 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 G3V2L1 256 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 XPO1O14980 1071 aaKnown RBP11.29□□□□□ -0.6
CCDC40-203ENST00000374877 ZNF286BP0CG31 522 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 CCDC130P13994 396 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 PSMC3P17980 439 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 ME2P23368 584 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 SPRP35270 261 aaPredicted RBP11.29□□□□□ -0.6
CCDC40-203ENST00000374877 POU5F1BQ06416 359 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 NAB1Q13506 487 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 GRTP1Q5TC63 336 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 FSTL4Q6MZW2 842 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 TTC30AQ86WT1 665 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 CCDC185Q8N715 623 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 TRPV1Q8NER1 839 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 SNRNP27Q8WVK2 155 aaKnown RBP11.29□□□□□ -0.6
CCDC40-203ENST00000374877 KHSRPQ92945 711 aaKnown RBP eCLIP11.29□□□□□ -0.6
CCDC40-203ENST00000374877 CCT7Q99832 543 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 SEMA6AQ9H2E6 1030 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 NMRAL1Q9HBL8 299 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 TRIP11Q15643 1979 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 ARL4AP40617 200 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 PPIDQ08752 370 aaKnown RBP11.29□□□□□ -0.6
CCDC40-203ENST00000374877 DCTN2Q13561 401 aaKnown RBP11.29□□□□□ -0.6
CCDC40-203ENST00000374877 ZNF410Q86VK4 478 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 RP9Q8TA86 221 aaKnown RBP11.29□□□□□ -0.6
CCDC40-203ENST00000374877 GAB3Q8WWW8 586 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 KLHL32Q96NJ5 620 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 FCRL3Q96P31 734 aaPredicted RBP11.29□□□□□ -0.6
CCDC40-203ENST00000374877 HES2Q9Y543 173 aa11.29□□□□□ -0.6
CCDC40-203ENST00000374877 HDAC3O15379 428 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 MFSD11O43934 449 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 PIGNO95427 931 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 HSPA13P48723 471 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 PRMT2P55345 433 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 GJA9P57773 515 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 IFRD2Q12894 506 aaPredicted RBP11.28□□□□□ -0.6
CCDC40-203ENST00000374877 FAM131BQ86XD5 332 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 C7orf31Q8N865 590 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 OR52K1Q8NGK4 314 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 P2RY11Q96G91 374 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 RBBP8Q99708 897 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 NAT9Q9BTE0 207 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 KATNAL1Q9BW62 490 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 NFKBIZQ9BYH8 718 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 FZD8Q9H461 694 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 LIN28AQ9H9Z2 209 aaKnown RBP11.28□□□□□ -0.6
CCDC40-203ENST00000374877 TIMMDC1Q9NPL8 285 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 ADA2Q9NZK5 511 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 THEGQ9P2T0 379 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 SYNJ2BP-COX16A0A087WUM0 186 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 TMEM114B3SHH9 223 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 TK2O00142 265 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 HAS3O00219 553 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 CSPG5O95196 566 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 C2P06681 752 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 FGFR3P22607 806 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms