RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 MX2P20592 715 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 MSNP26038 577 aaKnown RBP11.6□□□□□ -0.55
HSPG2-202ENST00000374676 HOXA6P31267 233 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 WASP42768 502 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 NR2C2P49116 596 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 STK19P49842 368 aaPredicted RBP11.6□□□□□ -0.55
HSPG2-202ENST00000374676 SERPINH1P50454 418 aaKnown RBP11.6□□□□□ -0.55
HSPG2-202ENST00000374676 IL10RBQ08334 325 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 GALNT2Q10471 571 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 STARD3Q14849 445 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 DLG2Q15700 870 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 HNRNPA1L2Q32P51 320 aaKnown RBP11.6□□□□□ -0.55
HSPG2-202ENST00000374676 TMEM92Q6UXU6 159 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 BBS12Q6ZW61 710 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 RFX6Q8HWS3 928 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 CCDC50Q8IVM0 306 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 TP53INP2Q8IXH6 220 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 CAMKK1Q8N5S9 505 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 FRS2Q8WU20 508 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 TLR10Q9BXR5 811 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 OSBPL8Q9BZF1 889 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 CEP44Q9C0F1 390 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 CD248Q9HCU0 757 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 PRMT8Q9NR22 394 aaPredicted RBP11.6□□□□□ -0.55
HSPG2-202ENST00000374676 C2orf42Q9NWW7 574 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 IPO11Q9UI26 975 aaKnown RBP11.6□□□□□ -0.55
HSPG2-202ENST00000374676 SLC8A2Q9UPR5 921 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 JRKLQ9Y4A0 524 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 EDDM13A0A1B0GTR0 161 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 TTC34A8MYJ7 566 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 K7ESF4 209 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 DFFAO00273 331 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 LAMTOR5O43504 91 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 SMAD6O43541 496 aaKnown RBP11.59□□□□□ -0.55
HSPG2-202ENST00000374676 GALR2O43603 387 aaPredicted RBP11.59□□□□□ -0.55
HSPG2-202ENST00000374676 MFSD11O43934 449 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 SYNCRIPO60506 623 aaKnown RBP11.59□□□□□ -0.55
HSPG2-202ENST00000374676 CST8O60676 142 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 EPHX1P07099 455 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 KRT10P13645 584 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 HLA-EP13747 358 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 COL9A1P20849 921 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 TGM2P21980 687 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 PRKCHP24723 683 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 NUMBP49757 651 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 SATB1Q01826 763 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 GBE1Q04446 702 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 ADCY2Q08462 1091 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 SLC10A2Q12908 348 aaPredicted RBP11.59□□□□□ -0.55
HSPG2-202ENST00000374676 CAMK2GQ13555 558 aaPredicted RBP11.59□□□□□ -0.55
HSPG2-202ENST00000374676 ZNF569Q5MCW4 686 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 TMCO4Q5TGY1 634 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 LINGO4Q6UY18 593 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 BZW1Q7L1Q6 419 aaKnown RBP11.59□□□□□ -0.55
HSPG2-202ENST00000374676 ZNF354CQ86Y25 554 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 PLPP6Q8IY26 295 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 MAML2Q8IZL2 1156 aaPredicted RBP11.59□□□□□ -0.55
HSPG2-202ENST00000374676 ATP11CQ8NB49 1132 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 NETO2Q8NC67 525 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 PTPRN2Q92932 1015 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 FATE1Q969F0 183 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 ISG20Q96AZ6 181 aaKnown RBP11.59□□□□□ -0.55
HSPG2-202ENST00000374676 ZNF599Q96NL3 588 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 TSGA13Q96PP4 275 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 BRD8Q9H0E9 1235 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 CARD9Q9H257 536 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 FBRSQ9HAH7 460 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 PDFQ9HBH1 243 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 POLMQ9NP87 494 aaPredicted RBP11.59□□□□□ -0.55
HSPG2-202ENST00000374676 PRSS16Q9NQE7 514 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 DTLQ9NZJ0 730 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 FBXO4Q9UKT5 387 aa11.59□□□□□ -0.55
HSPG2-202ENST00000374676 J3KR12 359 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 K7ERQ8 282 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 MAFKO60675 156 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 ZNF821O75541 412 aaPredicted RBP11.58□□□□□ -0.56
HSPG2-202ENST00000374676 ALDH1A2O94788 518 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 TJP3O95049 919 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 TDGF1P13385 188 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 CCNCP24863 283 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 GARSP41250 739 aaKnown RBP11.58□□□□□ -0.56
HSPG2-202ENST00000374676 ZNF33AQ06730 810 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 RFTN1Q14699 578 aaPredicted RBP11.58□□□□□ -0.56
HSPG2-202ENST00000374676 PDK1Q15118 436 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 ACCSLQ4AC99 568 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 C9orf64Q5T6V5 341 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 DCAF12L1Q5VU92 463 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 KAZNQ674X7 775 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 KIAA1211LQ6NV74 962 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 ARHGAP36Q6ZRI8 547 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 SLC35F6Q8N357 371 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 ATPAF2Q8N5M1 289 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 PCDH20Q8N6Y1 951 aaKnown RBP11.58□□□□□ -0.56
HSPG2-202ENST00000374676 ZNF366Q8N895 744 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 TSTD1Q8NFU3 115 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 OR2T3Q8NH03 318 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 OLFM3Q96PB7 478 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 PRRX2Q99811 253 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 HERPUD2Q9BSE4 406 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 HEMGNQ9BXL5 484 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms