RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 LRRC49Q8IUZ0 686 aa15.33■□□□□ 0.04
HSPG2-201ENST00000374673 C1orf210Q8IVY1 113 aa15.33■□□□□ 0.04
HSPG2-201ENST00000374673 NETO2Q8NC67 525 aa15.33■□□□□ 0.04
HSPG2-201ENST00000374673 CASKIN2Q8WXE0 1202 aa15.33■□□□□ 0.04
HSPG2-201ENST00000374673 PDFQ9HBH1 243 aa15.33■□□□□ 0.04
HSPG2-201ENST00000374673 CD248Q9HCU0 757 aa15.33■□□□□ 0.04
HSPG2-201ENST00000374673 SUN2Q9UH99 717 aa15.33■□□□□ 0.04
HSPG2-201ENST00000374673 SLC8A2Q9UPR5 921 aa15.33■□□□□ 0.04
HSPG2-201ENST00000374673 RAD54BQ9Y620 910 aa15.33■□□□□ 0.04
HSPG2-201ENST00000374673 ZNF318Q5VUA4 2279 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 A0A1W2PQF6 199 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 TTC34A8MYJ7 566 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 LAMTOR5O43504 91 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 CST8O60676 142 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 PRAMEF11O60813 436 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 MT-CO1P00395 513 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 EPHX1P07099 455 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 COL9A1P20849 921 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 TGM2P21980 687 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 MSNP26038 577 aaKnown RBP15.32■□□□□ 0.04
HSPG2-201ENST00000374673 DGKEP52429 567 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 GBE1Q04446 702 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 IL10RBQ08334 325 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 ADCY2Q08462 1091 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 GALNT2Q10471 571 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 SLC10A2Q12908 348 aaPredicted RBP15.32■□□□□ 0.04
HSPG2-201ENST00000374673 STARD3Q14849 445 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 INO80DQ53TQ3 878 aaPredicted RBP15.32■□□□□ 0.04
HSPG2-201ENST00000374673 ZNF569Q5MCW4 686 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 KAZNQ674X7 775 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 LINGO4Q6UY18 593 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 ARHGAP36Q6ZRI8 547 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 BBS12Q6ZW61 710 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 METTL3Q86U44 580 aaKnown RBP15.32■□□□□ 0.04
HSPG2-201ENST00000374673 SLC35F6Q8N357 371 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 ATPAF2Q8N5M1 289 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 CAMKK1Q8N5S9 505 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 ZNF366Q8N895 744 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 ATP11CQ8NB49 1132 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 FRS2Q8WU20 508 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 TLR10Q9BXR5 811 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 OSBPL8Q9BZF1 889 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 CEP44Q9C0F1 390 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 SP110Q9HB58 689 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 POLMQ9NP87 494 aaPredicted RBP15.32■□□□□ 0.04
HSPG2-201ENST00000374673 POLR3BQ9NW08 1133 aaPredicted RBP15.32■□□□□ 0.04
HSPG2-201ENST00000374673 DTLQ9NZJ0 730 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 IPO11Q9UI26 975 aaKnown RBP15.32■□□□□ 0.04
HSPG2-201ENST00000374673 JRKLQ9Y4A0 524 aa15.32■□□□□ 0.04
HSPG2-201ENST00000374673 ZDBF2Q9HCK1 2354 aa15.31■□□□□ 0.04
HSPG2-201ENST00000374673 EDDM13A0A1B0GTR0 161 aa15.31■□□□□ 0.04
HSPG2-201ENST00000374673 TARSL2A2RTX5 802 aaKnown RBP15.31■□□□□ 0.04
HSPG2-201ENST00000374673 J3KR12 359 aa15.31■□□□□ 0.04
HSPG2-201ENST00000374673 K7ESF4 209 aa15.31■□□□□ 0.04
HSPG2-201ENST00000374673 MAFKO60675 156 aa15.31■□□□□ 0.04
HSPG2-201ENST00000374673 MX2P20592 715 aa15.31■□□□□ 0.04
HSPG2-201ENST00000374673 GARSP41250 739 aaKnown RBP15.31■□□□□ 0.04
HSPG2-201ENST00000374673 DNA2P51530 1060 aa15.31■□□□□ 0.04
HSPG2-201ENST00000374673 DYNLT1P63172 113 aa15.31■□□□□ 0.04
HSPG2-201ENST00000374673 ZNF211Q13398 564 aaPredicted RBP15.31■□□□□ 0.04
HSPG2-201ENST00000374673 CAMK2GQ13555 558 aaPredicted RBP15.31■□□□□ 0.04
HSPG2-201ENST00000374673 LLGL1Q15334 1064 aa15.31■□□□□ 0.04
HSPG2-201ENST00000374673 DLG2Q15700 870 aa15.31■□□□□ 0.04
HSPG2-201ENST00000374673 SEL1L2Q5TEA6 688 aa15.31■□□□□ 0.04
HSPG2-201ENST00000374673 KIAA1211LQ6NV74 962 aa15.31■□□□□ 0.04
HSPG2-201ENST00000374673 AADACL2Q6P093 401 aa15.31■□□□□ 0.04
HSPG2-201ENST00000374673 C22orf39Q6P5X5 142 aa15.31■□□□□ 0.04
HSPG2-201ENST00000374673 MAML2Q8IZL2 1156 aaPredicted RBP15.31■□□□□ 0.04
HSPG2-201ENST00000374673 PTPRN2Q92932 1015 aa15.31■□□□□ 0.04
HSPG2-201ENST00000374673 HDAC11Q96DB2 347 aa15.31■□□□□ 0.04
HSPG2-201ENST00000374673 CARD9Q9H257 536 aa15.31■□□□□ 0.04
HSPG2-201ENST00000374673 FBRSQ9HAH7 460 aa15.31■□□□□ 0.04
HSPG2-201ENST00000374673 PRSS16Q9NQE7 514 aa15.31■□□□□ 0.04
HSPG2-201ENST00000374673 UBA2Q9UBT2 640 aaPredicted RBP15.31■□□□□ 0.04
HSPG2-201ENST00000374673 FBXO4Q9UKT5 387 aa15.31■□□□□ 0.04
HSPG2-201ENST00000374673 ACTL7AQ9Y615 435 aa15.31■□□□□ 0.04
HSPG2-201ENST00000374673 K7ERQ8 282 aa15.3■□□□□ 0.04
HSPG2-201ENST00000374673 SMAD6O43541 496 aaKnown RBP15.3■□□□□ 0.04
HSPG2-201ENST00000374673 GALR2O43603 387 aaPredicted RBP15.3■□□□□ 0.04
HSPG2-201ENST00000374673 SYNCRIPO60506 623 aaKnown RBP15.3■□□□□ 0.04
HSPG2-201ENST00000374673 MAP3K6O95382 1288 aa15.3■□□□□ 0.04
HSPG2-201ENST00000374673 C7P10643 843 aa15.3■□□□□ 0.04
HSPG2-201ENST00000374673 TDGF1P13385 188 aa15.3■□□□□ 0.04
HSPG2-201ENST00000374673 HOXA6P31267 233 aa15.3■□□□□ 0.04
HSPG2-201ENST00000374673 NR2C2P49116 596 aa15.3■□□□□ 0.04
HSPG2-201ENST00000374673 RFTN1Q14699 578 aaPredicted RBP15.3■□□□□ 0.04
HSPG2-201ENST00000374673 ACCSLQ4AC99 568 aa15.3■□□□□ 0.04
HSPG2-201ENST00000374673 TIGD7Q6NT04 549 aaPredicted RBP15.3■□□□□ 0.04
HSPG2-201ENST00000374673 NPNTQ6UXI9 565 aa15.3■□□□□ 0.04
HSPG2-201ENST00000374673 BZW1Q7L1Q6 419 aaKnown RBP15.3■□□□□ 0.04
HSPG2-201ENST00000374673 RASSF3Q86WH2 238 aa15.3■□□□□ 0.04
HSPG2-201ENST00000374673 PCDH20Q8N6Y1 951 aaKnown RBP15.3■□□□□ 0.04
HSPG2-201ENST00000374673 TSTD1Q8NFU3 115 aa15.3■□□□□ 0.04
HSPG2-201ENST00000374673 FATE1Q969F0 183 aa15.3■□□□□ 0.04
HSPG2-201ENST00000374673 ISG20Q96AZ6 181 aaKnown RBP15.3■□□□□ 0.04
HSPG2-201ENST00000374673 ZNF599Q96NL3 588 aa15.3■□□□□ 0.04
HSPG2-201ENST00000374673 OLFM3Q96PB7 478 aa15.3■□□□□ 0.04
HSPG2-201ENST00000374673 TSGA13Q96PP4 275 aa15.3■□□□□ 0.04
HSPG2-201ENST00000374673 HHIPQ96QV1 700 aa15.3■□□□□ 0.04
HSPG2-201ENST00000374673 HERPUD2Q9BSE4 406 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms