RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 TEX44Q53QW1 395 aa11.39□□□□□ -0.59
CSGALNACT2-201ENST00000374466 FSTL4Q6MZW2 842 aa11.39□□□□□ -0.59
CSGALNACT2-201ENST00000374466 PCGF5Q86SE9 256 aa11.39□□□□□ -0.59
CSGALNACT2-201ENST00000374466 YAF2Q8IY57 180 aa11.39□□□□□ -0.59
CSGALNACT2-201ENST00000374466 BBOF1Q8ND07 529 aa11.39□□□□□ -0.59
CSGALNACT2-201ENST00000374466 OR52K2Q8NGK3 314 aa11.39□□□□□ -0.59
CSGALNACT2-201ENST00000374466 EZH1Q92800 747 aaPredicted RBP11.39□□□□□ -0.59
CSGALNACT2-201ENST00000374466 TRIB3Q96RU7 358 aa11.39□□□□□ -0.59
CSGALNACT2-201ENST00000374466 MAK16Q9BXY0 300 aaKnown RBP11.39□□□□□ -0.59
CSGALNACT2-201ENST00000374466 SLC25A51Q9H1U9 297 aa11.39□□□□□ -0.59
CSGALNACT2-201ENST00000374466 LINC00597Q9H2U6 94 aa11.39□□□□□ -0.59
CSGALNACT2-201ENST00000374466 KDM4CQ9H3R0 1056 aa11.39□□□□□ -0.59
CSGALNACT2-201ENST00000374466 ERVW-1Q9UQF0 538 aa11.39□□□□□ -0.59
CSGALNACT2-201ENST00000374466 LOC285095A0A1B0GVY8 99 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 KRIT1O00522 736 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 MCF2LO15068 1137 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 AP1G1O43747 822 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 TULP3O75386 442 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 RHOCP08134 193 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 PECAM1P16284 738 aaPredicted RBP11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 DGKGP49619 791 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 PARP6Q2NL67 630 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 PHLDB2Q86SQ0 1253 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 EDAQ92838 391 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 PAK5Q9P286 719 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 OTOL1A6NHN0 477 aaPredicted RBP11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 VAV1P15498 845 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 GBP2P32456 591 aaPredicted RBP11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 PAFAH1B1P43034 410 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 PTPN5P54829 565 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 OTUD4Q01804 1114 aaKnown RBP11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 BYSLQ13895 437 aaKnown RBP11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 KCNT1Q5JUK3 1230 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 TMEM215Q68D42 235 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 RETSATQ6NUM9 610 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 ARRDC2Q8TBH0 407 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 ACTL9Q8TC94 416 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 RNF34Q969K3 372 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 HMCESQ96FZ2 354 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 GOLPH3Q9H4A6 298 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 GDF3Q9NR23 364 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 SUN2Q9UH99 717 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 WNT6Q9Y6F9 365 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 PDE4DIPQ5VU43 2346 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 FGGP02679 453 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 DLDP09622 509 aaKnown RBP11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 PTPN3P26045 913 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 GUCY2DQ02846 1103 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 MPP3Q13368 585 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 DUPD1Q68J44 220 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 SCYL2Q6P3W7 929 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 C12orf40Q86WS4 652 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 RFX6Q8HWS3 928 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 WFDC5Q8TCV5 224 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 CSGALNACT1Q8TDX6 532 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 PTCD2Q8WV60 388 aaKnown RBP11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 HTR3CQ8WXA8 447 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 GPATCH2LQ9NWQ4 482 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 SEPT3Q9UH03 358 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 MRPS17Q9Y2R5 130 aaKnown RBP11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 ANKRD36A6QL64 1941 aa11.38□□□□□ -0.59
CSGALNACT2-201ENST00000374466 EFCAB8A8MWE9 144 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 E7ESA3 106 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 MMP2P08253 660 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 RPS24P62847 133 aaKnown RBP11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 GBE1Q04446 702 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 SMTNL2Q2TAL5 461 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 ZNF528Q3MIS6 628 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 TTC27Q6P3X3 843 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 NCEH1Q6PIU2 408 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 KDELC1Q6UW63 502 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 MFN1Q8IWA4 741 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 P2RY13Q9BPV8 354 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 HDAC8Q9BY41 377 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 NDFIP2Q9NV92 336 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 VPS51Q9UID3 782 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 MKI67P46013 3256 aaKnown RBP11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 RGSL1A5PLK6 1076 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 TRAFD1O14545 582 aaPredicted RBP11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 TP73O15350 636 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 CTIFO43310 598 aaKnown RBP11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 APODP05090 189 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 OR1E1P30953 314 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 GDI1P31150 447 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 CSKP41240 450 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 SIGLEC14Q08ET2 396 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 SLC44A4Q53GD3 710 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 FSCBQ5H9T9 825 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 ITPRIPL1Q6GPH6 555 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 WDR93Q6P2C0 686 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 RASSF3Q86WH2 238 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 RNF135Q8IUD6 432 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 FERMT1Q9BQL6 677 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 BBS2Q9BXC9 721 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 KCNH6Q9H252 994 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 EBF1Q9UH73 591 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 NUDT5Q9UKK9 219 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 EDDM13A0A1B0GTR0 161 aa11.37□□□□□ -0.59
CSGALNACT2-201ENST00000374466 CHRNB1P11230 501 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms