RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 DNASE1L3Q13609 305 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 NOMO1Q15155 1222 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 SPDYE2Q495Y8 402 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 PPM1JQ5JR12 505 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 FOCADQ5VW36 1801 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 ABRAXAS1Q6UWZ7 409 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 B3GNT9Q6UX72 402 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 DSG4Q86SJ6 1040 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 C11orf74Q86VG3 221 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 LDHDQ86WU2 507 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 CCDC60Q8IWA6 550 aaPredicted RBP13.12□□□□□ -0.31
PRPF4-201ENST00000374198 RAB2BQ8WUD1 216 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 PBXIP1Q96AQ6 731 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 FAR2Q96K12 515 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 HOXD1Q9GZZ0 328 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 MUC3BQ9H195 1237 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 SCUBE2Q9NQ36 999 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 PCDHGA7Q9Y5G6 932 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 H7C0C1 242 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 EEF1DP29692 281 aaKnown RBP13.12□□□□□ -0.31
PRPF4-201ENST00000374198 ATP5OP48047 213 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 IFITM3Q01628 133 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 OCA2Q04671 838 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 Q3C1V9 767 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 TTC23LQ6PF05 361 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 GADL1Q6ZQY3 521 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 MAP4K3Q8IVH8 894 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 FNIP1Q8TF40 1166 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 GLT1D1Q96MS3 346 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 TEKT3Q9BXF9 490 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 WDR12Q9GZL7 423 aaKnown RBP13.12□□□□□ -0.31
PRPF4-201ENST00000374198 SLC17A6Q9P2U8 582 aa13.12□□□□□ -0.31
PRPF4-201ENST00000374198 SEC14L2O76054 403 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 IL18RAPO95256 599 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 ARP10275 920 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 ADORA2AP29274 412 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 MAGEA3P43357 314 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 MAGEA6P43360 314 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 PPIL2Q13356 520 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 INTS11Q5TA45 600 aaKnown RBP13.11□□□□□ -0.31
PRPF4-201ENST00000374198 TMEM198Q66K66 360 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 SLC39A4Q6P5W5 647 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 CYP2R1Q6VVX0 501 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 MICALL2Q8IY33 904 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 UNC5BQ8IZJ1 945 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 SDR16C5Q8N3Y7 309 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 ZNF486Q96H40 463 aaPredicted RBP13.11□□□□□ -0.31
PRPF4-201ENST00000374198 CSF3RQ99062 836 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 CALN1Q9BXU9 219 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 TP63Q9H3D4 680 aaPredicted RBP13.11□□□□□ -0.31
PRPF4-201ENST00000374198 APOBEC3GQ9HC16 384 aaKnown RBP13.11□□□□□ -0.31
PRPF4-201ENST00000374198 ADARB2Q9NS39 739 aaKnown RBP13.11□□□□□ -0.31
PRPF4-201ENST00000374198 KLQ9UEF7 1012 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 CNTN6Q9UQ52 1028 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 PCDHGA3Q9Y5H0 932 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 GAKO14976 1311 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 E7ENX8 843 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 KMOO15229 486 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 HDAC3O15379 428 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 KCNN4O15554 427 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 STAM2O75886 525 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 CLIC3O95833 236 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 POLR2IP36954 125 aaKnown RBP13.11□□□□□ -0.31
PRPF4-201ENST00000374198 RAD23AP54725 363 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 KRT76Q01546 638 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 MAPRE1Q15691 268 aaKnown RBP13.11□□□□□ -0.31
PRPF4-201ENST00000374198 CYP4A22Q5TCH4 519 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 CHST15Q7LFX5 561 aaPredicted RBP13.11□□□□□ -0.31
PRPF4-201ENST00000374198 ERMP1Q7Z2K6 904 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 SNX29P2Q8IUI4 249 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 KIAA0319LQ8IZA0 1049 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 TNS4Q8IZW8 715 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 GPD1LQ8N335 351 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 TTC30BQ8N4P2 665 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 PCDH20Q8N6Y1 951 aaKnown RBP13.11□□□□□ -0.31
PRPF4-201ENST00000374198 MCUQ8NE86 351 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 FBXL20Q96IG2 436 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 SH2D3AQ9BRG2 576 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 ILKAPQ9H0C8 392 aaPredicted RBP13.11□□□□□ -0.31
PRPF4-201ENST00000374198 SDCBP2Q9H190 292 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 CD320Q9NPF0 282 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 CYP26B1Q9NR63 512 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 ZNF358Q9NW07 568 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 GDAP2Q9NXN4 497 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 PRELID1Q9Y255 219 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 PCDHAC2Q9Y5I4 1007 aa13.11□□□□□ -0.31
PRPF4-201ENST00000374198 ILVBLA1L0T0 632 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 CENPBD1B2RD01 187 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 RPS12P25398 132 aaKnown RBP13.1□□□□□ -0.31
PRPF4-201ENST00000374198 BMPR1AP36894 532 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 GMPRP36959 345 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 HLCSP50747 726 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 UBXN2AP68543 259 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 BFSP2Q13515 415 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 ZACNQ401N2 412 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 ATAD3BQ5T9A4 648 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 IRAK1BP1Q5VVH5 260 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 SEL1L3Q68CR1 1132 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 PLEKHG7Q6ZR37 379 aa13.1□□□□□ -0.31
PRPF4-201ENST00000374198 CYS1Q717R9 158 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms