RNA–Protein interactions for RNA: ENST00000373795.6

SRSF4-201, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRSF4, Length 2,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-201ENST00000373795 SLC39A8Q9C0K1 460 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 BRD8Q9H0E9 1235 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 KCNK4Q9NYG8 393 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 ARHGAP42A6NI28 874 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 PITPNM1O00562 1244 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 KRT36O76013 467 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 UPP2O95045 317 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 AP2A1O95782 977 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 EFEMP1Q12805 493 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 MGAT5BQ3V5L5 792 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 MANEALQ5VSG8 457 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 ATG16L1Q676U5 607 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 STEAP4Q687X5 459 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 PRSS55Q6UWB4 352 aaPredicted RBP20.48■□□□□ 0.87
SRSF4-201ENST00000373795 ZCCHC23Q6ZST2 131 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 FBXO27Q8NI29 283 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 SEPT5Q99719 369 aaPredicted RBP20.48■□□□□ 0.87
SRSF4-201ENST00000373795 GBA3Q9H227 469 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 FBXO44Q9H4M3 255 aa20.48■□□□□ 0.87
SRSF4-201ENST00000373795 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.48■□□□□ 0.873e-6■■■□□ 15
SRSF4-201ENST00000373795 PPARGC1AQ9UBK2 798 aaKnown RBP20.48■□□□□ 0.87
SRSF4-201ENST00000373795 E9PAM4 449 aa20.47■□□□□ 0.87
SRSF4-201ENST00000373795 ALDH1A2O94788 518 aa20.47■□□□□ 0.87
SRSF4-201ENST00000373795 LMNAP02545 664 aaKnown RBP20.47■□□□□ 0.87
SRSF4-201ENST00000373795 PRMT2P55345 433 aa20.47■□□□□ 0.87
SRSF4-201ENST00000373795 RCN1Q15293 331 aa20.47■□□□□ 0.87
SRSF4-201ENST00000373795 RASIP1Q5U651 963 aa20.47■□□□□ 0.87
SRSF4-201ENST00000373795 PIK3R6Q5UE93 754 aa20.47■□□□□ 0.87
SRSF4-201ENST00000373795 KCTD11Q693B1 232 aa20.47■□□□□ 0.87
SRSF4-201ENST00000373795 NPAS4Q8IUM7 802 aa20.47■□□□□ 0.87
SRSF4-201ENST00000373795 TRIM42Q8IWZ5 723 aa20.47■□□□□ 0.87
SRSF4-201ENST00000373795 MICAL1Q8TDZ2 1067 aa20.47■□□□□ 0.87
SRSF4-201ENST00000373795 MTBPQ96DY7 904 aa20.47■□□□□ 0.87
SRSF4-201ENST00000373795 SERPINB11Q96P15 392 aa20.47■□□□□ 0.87
SRSF4-201ENST00000373795 FCRL3Q96P31 734 aaPredicted RBP20.47■□□□□ 0.87
SRSF4-201ENST00000373795 ENO1P06733 434 aaKnown RBP20.46■□□□□ 0.87
SRSF4-201ENST00000373795 TPH1P17752 444 aa20.46■□□□□ 0.87
SRSF4-201ENST00000373795 PGAM1P18669 254 aa20.46■□□□□ 0.87
SRSF4-201ENST00000373795 AQP5P55064 265 aa20.46■□□□□ 0.87
SRSF4-201ENST00000373795 DUSP4Q13115 394 aa20.46■□□□□ 0.87
SRSF4-201ENST00000373795 BLMHQ13867 455 aa20.46■□□□□ 0.87
SRSF4-201ENST00000373795 DNAAF3Q8N9W5 541 aa20.46■□□□□ 0.87
SRSF4-201ENST00000373795 RNF208Q9H0X6 261 aa20.46■□□□□ 0.87
SRSF4-201ENST00000373795 PAK6Q9NQU5 681 aaPredicted RBP20.46■□□□□ 0.87
SRSF4-201ENST00000373795 MKS1Q9NXB0 559 aa20.46■□□□□ 0.87
SRSF4-201ENST00000373795 MTMR11A4FU01 709 aa20.46■□□□□ 0.87
SRSF4-201ENST00000373795 MTSS1O43312 755 aa20.46■□□□□ 0.87
SRSF4-201ENST00000373795 SMNDC1O75940 238 aaKnown RBP eCLIP20.46■□□□□ 0.871e-10■□□□□ 8.8
SRSF4-201ENST00000373795 LUC7L3O95232 432 aaKnown RBP20.46■□□□□ 0.87
SRSF4-201ENST00000373795 YWHAQP27348 245 aa20.46■□□□□ 0.87
SRSF4-201ENST00000373795 CRHR1P34998 444 aa20.46■□□□□ 0.87
SRSF4-201ENST00000373795 MAGEA11P43364 429 aa20.46■□□□□ 0.87
SRSF4-201ENST00000373795 MLLT6P55198 1093 aaPredicted RBP20.46■□□□□ 0.87
SRSF4-201ENST00000373795 TAF10Q12962 218 aa20.46■□□□□ 0.87
SRSF4-201ENST00000373795 CERCAMQ5T4B2 595 aa20.46■□□□□ 0.87
SRSF4-201ENST00000373795 MIB1Q86YT6 1006 aa20.46■□□□□ 0.87
SRSF4-201ENST00000373795 TEX9Q8N6V9 391 aa20.46■□□□□ 0.87
SRSF4-201ENST00000373795 TRHDEQ9UKU6 1024 aa20.46■□□□□ 0.87
SRSF4-201ENST00000373795 VANGL2Q9ULK5 521 aa20.46■□□□□ 0.87
SRSF4-201ENST00000373795 TLR6Q9Y2C9 796 aa20.46■□□□□ 0.87
SRSF4-201ENST00000373795 PSAT1Q9Y617 370 aa20.46■□□□□ 0.87
SRSF4-201ENST00000373795 RPS6KL1Q9Y6S9 549 aa20.46■□□□□ 0.87
SRSF4-201ENST00000373795 OR6C75A6NL08 312 aa20.45■□□□□ 0.86
SRSF4-201ENST00000373795 CAPN14A8MX76 684 aa20.45■□□□□ 0.86
SRSF4-201ENST00000373795 B2RBV5 119 aa20.45■□□□□ 0.86
SRSF4-201ENST00000373795 BPGMP07738 259 aa20.45■□□□□ 0.86
SRSF4-201ENST00000373795 ERVK-10P10266 1014 aa20.45■□□□□ 0.86
SRSF4-201ENST00000373795 HOXC13P31276 330 aa20.45■□□□□ 0.86
SRSF4-201ENST00000373795 CCDC6Q16204 474 aa20.45■□□□□ 0.86
SRSF4-201ENST00000373795 SPATA22Q8NHS9 363 aa20.45■□□□□ 0.86
SRSF4-201ENST00000373795 FBXO32Q969P5 355 aa20.45■□□□□ 0.86
SRSF4-201ENST00000373795 SLC39A13Q96H72 371 aa20.45■□□□□ 0.86
SRSF4-201ENST00000373795 HIPK3Q9H422 1215 aa20.45■□□□□ 0.86
SRSF4-201ENST00000373795 CATSPERBQ9H7T0 1116 aa20.45■□□□□ 0.86
SRSF4-201ENST00000373795 KIF1CO43896 1103 aaKnown RBP20.45■□□□□ 0.86
SRSF4-201ENST00000373795 MAFKO60675 156 aa20.45■□□□□ 0.86
SRSF4-201ENST00000373795 F7P08709 466 aaPredicted RBP20.45■□□□□ 0.86
SRSF4-201ENST00000373795 ATP6V1C1P21283 382 aa20.45■□□□□ 0.86
SRSF4-201ENST00000373795 TBX4P57082 545 aa20.45■□□□□ 0.86
SRSF4-201ENST00000373795 GPR17Q13304 367 aa20.45■□□□□ 0.86
SRSF4-201ENST00000373795 FAM91A1Q658Y4 838 aa20.45■□□□□ 0.86
SRSF4-201ENST00000373795 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.45■□□□□ 0.863e-7■■■□□ 16.8
SRSF4-201ENST00000373795 CYS1Q717R9 158 aa20.45■□□□□ 0.86
SRSF4-201ENST00000373795 ATPAF2Q8N5M1 289 aa20.45■□□□□ 0.86
SRSF4-201ENST00000373795 DTX3LQ8TDB6 740 aa20.45■□□□□ 0.86
SRSF4-201ENST00000373795 GIPC2Q8TF65 315 aa20.45■□□□□ 0.86
SRSF4-201ENST00000373795 APBB2Q92870 758 aa20.45■□□□□ 0.86
SRSF4-201ENST00000373795 IL37Q9NZH6 218 aa20.45■□□□□ 0.86
SRSF4-201ENST00000373795 ADAM12O43184 909 aa20.44■□□□□ 0.86
SRSF4-201ENST00000373795 ATP9BO43861 1147 aa20.44■□□□□ 0.86
SRSF4-201ENST00000373795 SNNO75324 88 aaPredicted RBP20.44■□□□□ 0.86
SRSF4-201ENST00000373795 HMBSP08397 361 aa20.44■□□□□ 0.86
SRSF4-201ENST00000373795 PGM1P36871 562 aa20.44■□□□□ 0.86
SRSF4-201ENST00000373795 NIPAL4Q0D2K0 466 aa20.44■□□□□ 0.86
SRSF4-201ENST00000373795 RCN2Q14257 317 aa20.44■□□□□ 0.86
SRSF4-201ENST00000373795 PSMD5Q16401 504 aa20.44■□□□□ 0.86
SRSF4-201ENST00000373795 C16orf46Q6P387 395 aa20.44■□□□□ 0.86
SRSF4-201ENST00000373795 CRLF3Q8IUI8 442 aa20.44■□□□□ 0.86
SRSF4-201ENST00000373795 NRG4Q8WWG1 115 aa20.44■□□□□ 0.86
SRSF4-201ENST00000373795 DNAJC9Q8WXX5 260 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms