RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 NIPAL4Q0D2K0 466 aa15.99■□□□□ 0.15
HDAC8-209ENST00000373589 CDH17Q12864 832 aa15.99■□□□□ 0.15
HDAC8-209ENST00000373589 FRG1Q14331 258 aaKnown RBP15.99■□□□□ 0.15
HDAC8-209ENST00000373589 GLIPR1L2Q4G1C9 344 aa15.99■□□□□ 0.15
HDAC8-209ENST00000373589 RABGAP1LQ5R372 815 aa15.99■□□□□ 0.15
HDAC8-209ENST00000373589 ZNF449Q6P9G9 518 aa15.99■□□□□ 0.15
HDAC8-209ENST00000373589 C4orf33Q8N1A6 199 aa15.99■□□□□ 0.15
HDAC8-209ENST00000373589 ANKRD42Q8N9B4 389 aa15.99■□□□□ 0.15
HDAC8-209ENST00000373589 PRICKLE1Q96MT3 831 aaPredicted RBP15.99■□□□□ 0.15
HDAC8-209ENST00000373589 APOL2Q9BQE5 337 aa15.99■□□□□ 0.15
HDAC8-209ENST00000373589 SLC25A51Q9H1U9 297 aa15.99■□□□□ 0.15
HDAC8-209ENST00000373589 SAMD15Q9P1V8 674 aa15.99■□□□□ 0.15
HDAC8-209ENST00000373589 LZTS1Q9Y250 596 aa15.99■□□□□ 0.15
HDAC8-209ENST00000373589 SLC4A7Q9Y6M7 1214 aa15.99■□□□□ 0.15
HDAC8-209ENST00000373589 ZFP37Q9Y6Q3 630 aaPredicted RBP15.99■□□□□ 0.15
HDAC8-209ENST00000373589 MAGEB16A2A368 324 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 SPAG7O75391 227 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 POLBP06746 335 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 ADH1AP07327 375 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 CA8P35219 290 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 BMPR1AP36894 532 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 ACVRL1P37023 503 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 SLC10A7Q0GE19 358 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 LRRC14Q15048 493 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 SPANXN3Q5MJ09 141 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 CERCAMQ5T4B2 595 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 ADGRF1Q5T601 910 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 MARC1Q5VT66 337 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 TTC39BQ5VTQ0 682 aaPredicted RBP15.98■□□□□ 0.15
HDAC8-209ENST00000373589 DENND5AQ6IQ26 1287 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 SH2D5Q6ZV89 423 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 UNC5BQ8IZJ1 945 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 MGARPQ8TDB4 240 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 SGSM3Q96HU1 749 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 SLC22A12Q96S37 553 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 TBL1YQ9BQ87 522 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 LRRC3Q9BY71 257 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 IL22Q9GZX6 179 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 SP110Q9HB58 689 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 NKIRAS1Q9NYS0 192 aa15.98■□□□□ 0.15
HDAC8-209ENST00000373589 PLXNA4Q9HCM2 1894 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 FAM237BA0A1B0GVD1 139 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 NDUFAB1O14561 156 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 TLL1O43897 1013 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 GREM1O60565 184 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 UGT1A9O60656 530 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 PRAMEF11O60813 436 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 USP1O94782 785 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 LATS1O95835 1130 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 MBL2P11226 248 aaPredicted RBP15.97■□□□□ 0.15
HDAC8-209ENST00000373589 ERVFC1P60507 584 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 RPS24P62847 133 aaKnown RBP15.97■□□□□ 0.15
HDAC8-209ENST00000373589 CCDC149Q6ZUS6 474 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 GAREM2Q75VX8 874 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 MARK2Q7KZI7 788 aaKnown RBP15.97■□□□□ 0.15
HDAC8-209ENST00000373589 TMC8Q8IU68 726 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 C7orf61Q8IZ16 206 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.97■□□□□ 0.15
HDAC8-209ENST00000373589 ADAMTS19Q8TE59 1207 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 ALKBH8Q96BT7 664 aaKnown RBP15.97■□□□□ 0.15
HDAC8-209ENST00000373589 PABPC5Q96DU9 382 aaKnown RBP15.97■□□□□ 0.15
HDAC8-209ENST00000373589 CHMP6Q96FZ7 201 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 IMP4Q96G21 291 aaKnown RBP15.97■□□□□ 0.15
HDAC8-209ENST00000373589 FCRL3Q96P31 734 aaPredicted RBP15.97■□□□□ 0.15
HDAC8-209ENST00000373589 CYP2S1Q96SQ9 504 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 MAGEH1Q9H213 219 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 UGT1A7Q9HAW7 530 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 UGT1A10Q9HAW8 530 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 UGT1A8Q9HAW9 530 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 PDFQ9HBH1 243 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 RPS6KL1Q9Y6S9 549 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 ZCWPW2A0A1B0GU75 182 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 CLDN11O75508 207 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 KRT37O76014 449 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 NEBLO76041 1014 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 ASMTLO95671 621 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 MT-ND3P03897 115 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 SNRPAP09012 282 aaKnown RBP15.97■□□□□ 0.15
HDAC8-209ENST00000373589 IRF1P10914 325 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 SGSHP51688 502 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 WDR4P57081 412 aaKnown RBP15.97■□□□□ 0.15
HDAC8-209ENST00000373589 MPP3Q13368 585 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 NAB1Q13506 487 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 TXNDC8Q6A555 127 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 FOXR1Q6PIV2 292 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 KDELC1Q6UW63 502 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 CES3Q6UWW8 571 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 RANBP10Q6VN20 620 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 CHST9Q7L1S5 443 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 CCDC117Q8IWD4 279 aaPredicted RBP15.97■□□□□ 0.15
HDAC8-209ENST00000373589 BANPQ8N9N5 519 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 KREMEN2Q8NCW0 462 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 IPMKQ8NFU5 416 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 OR52K2Q8NGK3 314 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 ZNF473Q8WTR7 871 aaKnown RBP15.97■□□□□ 0.15
HDAC8-209ENST00000373589 NSMCE1Q8WV22 266 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 CKAP2Q8WWK9 683 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 SERAC1Q96JX3 654 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 MRGPRX2Q96LB1 330 aa15.97■□□□□ 0.15
HDAC8-209ENST00000373589 TCF25Q9BQ70 676 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms