RNA–Protein interactions for RNA: ENST00000372994.1

C9orf16-201, Transcript of chromosome 9 open reading frame 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf16, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-201ENST00000372994 VCPIP1Q96JH7 1222 aa15.36■□□□□ 0.05
C9orf16-201ENST00000372994 TM7SF3Q9NS93 570 aa15.36■□□□□ 0.05
C9orf16-201ENST00000372994 FNDC3AQ9Y2H6 1198 aaKnown RBP15.36■□□□□ 0.05
C9orf16-201ENST00000372994 FARP1Q9Y4F1 1045 aaPredicted RBP15.36■□□□□ 0.05
C9orf16-201ENST00000372994 PCDHGB2Q9Y5G2 931 aa15.36■□□□□ 0.05
C9orf16-201ENST00000372994 SNX11Q9Y5W9 270 aa15.36■□□□□ 0.05
C9orf16-201ENST00000372994 DOCK9Q9BZ29 2069 aa15.36■□□□□ 0.05
C9orf16-201ENST00000372994 CACNA1BQ00975 2339 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 PLXNA2O75051 1894 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 TMEM131Q92545 1883 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 KMT2BQ9UMN6 2715 aaPredicted RBP15.35■□□□□ 0.05
C9orf16-201ENST00000372994 TBC1D3DA0A087WVF3 549 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 TBC1D3IA0A087WXS9 549 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 TBC1D3EA0A087X179 549 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 TBC1D3KA0A087X1G2 549 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 SPAARA0A1B0GVQ0 90 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 TBC1D3FA6NER0 549 aaPredicted RBP15.35■□□□□ 0.05
C9orf16-201ENST00000372994 TBC1D3LB9A6J9 549 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 C1QTNF3-AMACRE9PGA6 284 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 FAM72CH0Y354 149 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 CBX4O00257 560 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 VILLO15195 856 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 SMAD6O43541 496 aaKnown RBP15.35■□□□□ 0.05
C9orf16-201ENST00000372994 PLRG1O43660 514 aaKnown RBP15.35■□□□□ 0.05
C9orf16-201ENST00000372994 CBFA2T3O75081 653 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 RTN2O75298 545 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 ZNF821O75541 412 aaPredicted RBP15.35■□□□□ 0.05
C9orf16-201ENST00000372994 LRIG2O94898 1065 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 PLEKP08567 350 aaPredicted RBP15.35■□□□□ 0.05
C9orf16-201ENST00000372994 TBC1D3HP0C7X1 549 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 RHOQP17081 205 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 TNFAIP3P21580 790 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 GLDCP23378 1020 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 RRM1P23921 792 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 CTSKP43235 329 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 ZNF143P52747 638 aaPredicted RBP15.35■□□□□ 0.05
C9orf16-201ENST00000372994 RPL7AP62424 266 aaKnown RBP15.35■□□□□ 0.05
C9orf16-201ENST00000372994 FAM193AP78312 1265 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 SIM1P81133 766 aaPredicted RBP15.35■□□□□ 0.05
C9orf16-201ENST00000372994 SCAPQ12770 1279 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 KLHL40Q2TBA0 621 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 KCNT1Q5JUK3 1230 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 FAM72AQ5TYM5 149 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 TBC1D3GQ6DHY5 549 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 TBC1D3CQ6IPX1 549 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 FAM72DQ6L9T8 149 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 RETSATQ6NUM9 610 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 PPP1R2P3Q6NXS1 205 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 DNAJC24Q6P3W2 148 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 LINGO4Q6UY18 593 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 FAM72BQ86X60 149 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 NAXDQ8IW45 347 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 DRC7Q8IY82 874 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 TBC1D3Q8IZP1 549 aaPredicted RBP15.35■□□□□ 0.05
C9orf16-201ENST00000372994 CCDC185Q8N715 623 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 TMIEQ8NEW7 156 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 CCDC114Q96M63 670 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 NAP1L5Q96NT1 182 aaPredicted RBP15.35■□□□□ 0.05
C9orf16-201ENST00000372994 CAMK1GQ96NX5 476 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 CNPY3Q9BT09 278 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 SPON2Q9BUD6 331 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 ACE2Q9BYF1 805 aaPredicted RBP15.35■□□□□ 0.05
C9orf16-201ENST00000372994 MAGEB5Q9BZ81 275 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 AIPL1Q9NZN9 384 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 NEU3Q9UQ49 428 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 ASPMQ8IZT6 3477 aa15.35■□□□□ 0.05
C9orf16-201ENST00000372994 ANKRD62A6NC57 917 aa15.34■□□□□ 0.05
C9orf16-201ENST00000372994 LRRC53A6NM62 1247 aa15.34■□□□□ 0.05
C9orf16-201ENST00000372994 PLK4O00444 970 aa15.34■□□□□ 0.05
C9orf16-201ENST00000372994 DFNA5O60443 496 aa15.34■□□□□ 0.05
C9orf16-201ENST00000372994 CTSLP07711 333 aa15.34■□□□□ 0.05
C9orf16-201ENST00000372994 CHRNA3P32297 505 aa15.34■□□□□ 0.05
C9orf16-201ENST00000372994 ETFBP38117 255 aa15.34■□□□□ 0.05
C9orf16-201ENST00000372994 MAPKAPK2P49137 400 aa15.34■□□□□ 0.05
C9orf16-201ENST00000372994 CNTN1Q12860 1018 aa15.34■□□□□ 0.05
C9orf16-201ENST00000372994 FOXC1Q12948 553 aa15.34■□□□□ 0.05
C9orf16-201ENST00000372994 NR1I3Q14994 352 aa15.34■□□□□ 0.05
C9orf16-201ENST00000372994 TRIP6Q15654 476 aaKnown RBP15.34■□□□□ 0.05
C9orf16-201ENST00000372994 AGBL4Q5VU57 503 aa15.34■□□□□ 0.05
C9orf16-201ENST00000372994 SLFN11Q7Z7L1 901 aa15.34■□□□□ 0.05
C9orf16-201ENST00000372994 SLC6A18Q96N87 628 aa15.34■□□□□ 0.05
C9orf16-201ENST00000372994 EDEM3Q9BZQ6 932 aa15.34■□□□□ 0.05
C9orf16-201ENST00000372994 CEP44Q9C0F1 390 aa15.34■□□□□ 0.05
C9orf16-201ENST00000372994 ATP13A1Q9HD20 1204 aa15.34■□□□□ 0.05
C9orf16-201ENST00000372994 NDFIP2Q9NV92 336 aa15.34■□□□□ 0.05
C9orf16-201ENST00000372994 TMEM248Q9NWD8 314 aa15.34■□□□□ 0.05
C9orf16-201ENST00000372994 TAS2R14Q9NYV8 317 aa15.34■□□□□ 0.05
C9orf16-201ENST00000372994 ARHGAP20Q9P2F6 1191 aa15.34■□□□□ 0.05
C9orf16-201ENST00000372994 PCOLCE2Q9UKZ9 415 aa15.34■□□□□ 0.05
C9orf16-201ENST00000372994 USP24Q9UPU5 2620 aa15.34■□□□□ 0.05
C9orf16-201ENST00000372994 A0A1W2PR77 199 aa15.33■□□□□ 0.04
C9orf16-201ENST00000372994 WNT9AO14904 365 aa15.33■□□□□ 0.04
C9orf16-201ENST00000372994 CCP110O43303 1012 aa15.33■□□□□ 0.04
C9orf16-201ENST00000372994 BNIP3LO60238 219 aa15.33■□□□□ 0.04
C9orf16-201ENST00000372994 CD160O95971 181 aa15.33■□□□□ 0.04
C9orf16-201ENST00000372994 PRNPP04156 253 aa15.33■□□□□ 0.04
C9orf16-201ENST00000372994 L1CAMP32004 1257 aa15.33■□□□□ 0.04
C9orf16-201ENST00000372994 NUDT1P36639 197 aa15.33■□□□□ 0.04
C9orf16-201ENST00000372994 PRKCIP41743 596 aa15.33■□□□□ 0.04
C9orf16-201ENST00000372994 SERPINH1P50454 418 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms