RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 DMGDHQ9UI17 866 aaKnown RBP11.7□□□□□ -0.54
VCL-202ENST00000372755 CHKBQ9Y259 395 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 MANSC4A6NHS7 340 aaPredicted RBP11.69□□□□□ -0.54
VCL-202ENST00000372755 PTGES3LE9PB15 166 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 CTSEP14091 401 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 LRPAP1P30533 357 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 SSTR1P30872 391 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 CRATP43155 626 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 MAPK8P45983 427 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 SOX10P56693 466 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 C9orf131Q5VYM1 1079 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 TRAPPC5Q8IUR0 188 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 SCUBE3Q8IX30 993 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 KATNAL2Q8IYT4 538 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 Q96MT0 163 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 IL22Q9GZX6 179 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 NOL6Q9H6R4 1146 aaKnown RBP11.69□□□□□ -0.54
VCL-202ENST00000372755 ZDHHC6Q9H6R6 413 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 CYLDQ9NQC7 956 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 QRICH2Q9H0J4 1663 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 ASTN2O75129 1339 aaPredicted RBP11.69□□□□□ -0.54
VCL-202ENST00000372755 SPATA31A5Q5VU36 1347 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 SPATA31A7Q8IWB4 1347 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 EIF2B2P49770 351 aaKnown RBP11.69□□□□□ -0.54
VCL-202ENST00000372755 THOP1P52888 689 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 TGFB2P61812 414 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 MAPK11Q15759 364 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 PGLYRP2Q96PD5 576 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 RNF17Q9BXT8 1623 aaKnown RBP11.69□□□□□ -0.54
VCL-202ENST00000372755 RARAP10276 462 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 RCVRNP35243 200 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 POLD2P49005 469 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 RARRES1P49788 294 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 PSEN2P49810 448 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 KLHL12Q53G59 568 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 C16orf59Q7L2K0 433 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 UROC1Q96N76 676 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 C1orf50Q9BV19 199 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 ADAM28Q9UKQ2 775 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 FBXL21Q9UKT6 434 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 SORCS3Q9UPU3 1222 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 CHADO15335 359 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 MIPP30301 263 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 ALDH5A1P51649 535 aaPredicted RBP11.69□□□□□ -0.54
VCL-202ENST00000372755 SMIM11AP58511 58 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 IRF8Q02556 426 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 BHLHB9Q6PI77 547 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 FAM83AQ86UY5 434 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 DCUN1D5Q9BTE7 237 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 SEMA4BQ9NPR2 832 aaPredicted RBP11.69□□□□□ -0.54
VCL-202ENST00000372755 CDH9Q9ULB4 789 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 ANGPT4Q9Y264 503 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 DCXO43602 365 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 TOMM20Q15388 145 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 SEC23AQ15436 765 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 INSCQ1MX18 579 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 LYPLAL1Q5VWZ2 237 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 CES3Q6UWW8 571 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 CAMK1DQ8IU85 385 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 PSTKQ8IV42 348 aaKnown RBP11.69□□□□□ -0.54
VCL-202ENST00000372755 SELENOMQ8WWX9 145 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 C2orf49Q9BVC5 232 aaPredicted RBP11.69□□□□□ -0.54
VCL-202ENST00000372755 NUAK2Q9H093 628 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 ETNK2Q9NVF9 386 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.69□□□□□ -0.54
VCL-202ENST00000372755 FRMPD4Q14CM0 1322 aa11.69□□□□□ -0.54
VCL-202ENST00000372755 PQBP1O60828 265 aaKnown RBP11.68□□□□□ -0.54
VCL-202ENST00000372755 PIGNO95427 931 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 GNRH1P01148 92 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 ITGA2P17301 1181 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 RHAGQ02094 409 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 CREMQ03060 361 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 SQLEQ14534 574 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 STXBP5Q5T5C0 1151 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 CDH24Q86UP0 819 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 POU5F2Q8N7G0 328 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 TBCDQ9BTW9 1192 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 CLN6Q9NWW5 311 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 BTBD7Q9P203 1132 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 INO80Q9ULG1 1556 aaPredicted RBP11.68□□□□□ -0.54
VCL-202ENST00000372755 RGL2O15211 777 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 NFKB1P19838 968 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 TTKP33981 857 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 TMEM119Q4V9L6 283 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 NEPROQ6NW34 567 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 PALB2Q86YC2 1186 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 SPATA20Q8TB22 786 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 MTFMTQ96DP5 389 aaKnown RBP11.68□□□□□ -0.54
VCL-202ENST00000372755 PGM2Q96G03 612 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 ABHD16BQ9H3Z7 469 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 ANKZF1Q9H8Y5 726 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 MAP10Q9P2G4 905 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 DNPEPQ9ULA0 475 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 KCNK1O00180 336 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 CSDE1O75534 798 aaKnown RBP11.68□□□□□ -0.54
VCL-202ENST00000372755 ZSCAN18Q8TBC5 510 aaPredicted RBP11.68□□□□□ -0.54
VCL-202ENST00000372755 KLQ9UEF7 1012 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 LYVE1Q9Y5Y7 322 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 QSOX1O00391 747 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 SNUPNO95149 360 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms