RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 MATN3O15232 486 aa29.43■■■□□ 2.3
SSBP3-204ENST00000371320 MT-CYBP00156 380 aaPredicted RBP29.43■■■□□ 2.3
SSBP3-204ENST00000371320 HADHAP40939 763 aa29.43■■■□□ 2.3
SSBP3-204ENST00000371320 SREBF2Q12772 1141 aa29.43■■■□□ 2.3
SSBP3-204ENST00000371320 PPP2R5DQ14738 602 aa29.43■■■□□ 2.3
SSBP3-204ENST00000371320 MAVSQ7Z434 540 aa29.43■■■□□ 2.3
SSBP3-204ENST00000371320 ACVR1CQ8NER5 493 aa29.43■■■□□ 2.3
SSBP3-204ENST00000371320 IPMKQ8NFU5 416 aa29.43■■■□□ 2.3
SSBP3-204ENST00000371320 WDR60Q8WVS4 1066 aa29.43■■■□□ 2.3
SSBP3-204ENST00000371320 SREK1Q8WXA9 508 aaKnown RBP29.43■■■□□ 2.3
SSBP3-204ENST00000371320 IL12RB2Q99665 862 aa29.43■■■□□ 2.3
SSBP3-204ENST00000371320 PCDHB8Q9UN66 801 aa29.43■■■□□ 2.3
SSBP3-204ENST00000371320 TDRD15B5MCY1 1934 aaKnown RBP29.43■■■□□ 2.3
SSBP3-204ENST00000371320 PTDSS1P48651 473 aaKnown RBP29.43■■■□□ 2.3
SSBP3-204ENST00000371320 IDH3AP50213 366 aa29.43■■■□□ 2.3
SSBP3-204ENST00000371320 RAP1GDS1P52306 607 aa29.43■■■□□ 2.3
SSBP3-204ENST00000371320 PCID2Q5JVF3 399 aa29.43■■■□□ 2.3
SSBP3-204ENST00000371320 RABGAP1LQ5R372 815 aa29.43■■■□□ 2.3
SSBP3-204ENST00000371320 ZNF598Q86UK7 904 aaKnown RBP29.43■■■□□ 2.3
SSBP3-204ENST00000371320 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP29.43■■■□□ 2.32e-6■■■■■ 40.9
SSBP3-204ENST00000371320 NMRAL1Q9HBL8 299 aa29.43■■■□□ 2.3
SSBP3-204ENST00000371320 G3V2L1 256 aa29.42■■■□□ 2.3
SSBP3-204ENST00000371320 KLHL2O95198 593 aa29.42■■■□□ 2.3
SSBP3-204ENST00000371320 OR4Q2P0C623 313 aa29.42■■■□□ 2.3
SSBP3-204ENST00000371320 ALOX15P16050 662 aaPredicted RBP29.42■■■□□ 2.3
SSBP3-204ENST00000371320 GRM3Q14832 879 aa29.42■■■□□ 2.3
SSBP3-204ENST00000371320 TAF11Q15544 211 aa29.42■■■□□ 2.3
SSBP3-204ENST00000371320 ANO4Q32M45 955 aa29.42■■■□□ 2.3
SSBP3-204ENST00000371320 DNAL1Q4LDG9 190 aa29.42■■■□□ 2.3
SSBP3-204ENST00000371320 PKN3Q6P5Z2 889 aa29.42■■■□□ 2.3
SSBP3-204ENST00000371320 SCN4BQ8IWT1 228 aa29.42■■■□□ 2.3
SSBP3-204ENST00000371320 KLHDC9Q8NEP7 349 aa29.42■■■□□ 2.3
SSBP3-204ENST00000371320 FAM161BQ96MY7 647 aa29.42■■■□□ 2.3
SSBP3-204ENST00000371320 TRMT13Q9NUP7 481 aaKnown RBP29.42■■■□□ 2.3
SSBP3-204ENST00000371320 NUDT5Q9UKK9 219 aa29.42■■■□□ 2.3
SSBP3-204ENST00000371320 PCDHB12Q9Y5F1 795 aa29.42■■■□□ 2.3
SSBP3-204ENST00000371320 SEC23IPQ9Y6Y8 1000 aaKnown RBP29.42■■■□□ 2.3
SSBP3-204ENST00000371320 TUBP50607 506 aa29.41■■■□□ 2.3
SSBP3-204ENST00000371320 CLNS1AP54105 237 aaKnown RBP29.41■■■□□ 2.3
SSBP3-204ENST00000371320 MXRA7P84157 204 aa29.41■■■□□ 2.3
SSBP3-204ENST00000371320 SLC39A12Q504Y0 691 aa29.41■■■□□ 2.3
SSBP3-204ENST00000371320 RAPH1Q70E73 1250 aa29.41■■■□□ 2.3
SSBP3-204ENST00000371320 CFAP61Q8NHU2 1237 aa29.41■■■□□ 2.3
SSBP3-204ENST00000371320 ZNF419Q96HQ0 510 aaPredicted RBP29.41■■■□□ 2.3
SSBP3-204ENST00000371320 GPR22Q99680 433 aa29.41■■■□□ 2.3
SSBP3-204ENST00000371320 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP29.41■■■□□ 2.3
SSBP3-204ENST00000371320 MOCS2O96007 188 aaPredicted RBP29.41■■■□□ 2.3
SSBP3-204ENST00000371320 POU6F1Q14863 301 aa29.41■■■□□ 2.3
SSBP3-204ENST00000371320 RCN1Q15293 331 aa29.41■■■□□ 2.3
SSBP3-204ENST00000371320 CCDC6Q16204 474 aa29.41■■■□□ 2.3
SSBP3-204ENST00000371320 ZC3HC1Q86WB0 502 aaKnown RBP29.41■■■□□ 2.3
SSBP3-204ENST00000371320 STMN2Q93045 179 aa29.41■■■□□ 2.3
SSBP3-204ENST00000371320 FICDQ9BVA6 458 aa29.41■■■□□ 2.3
SSBP3-204ENST00000371320 NDFIP2Q9NV92 336 aa29.41■■■□□ 2.3
SSBP3-204ENST00000371320 TLK1Q9UKI8 766 aa29.41■■■□□ 2.3
SSBP3-204ENST00000371320 PLA2G4CQ9UP65 541 aa29.41■■■□□ 2.3
SSBP3-204ENST00000371320 LRRC42Q9Y546 428 aa29.41■■■□□ 2.3
SSBP3-204ENST00000371320 MRPL42Q9Y6G3 142 aaKnown RBP29.41■■■□□ 2.3
SSBP3-204ENST00000371320 A0A1W2PQH9 124 aa29.4■■■□□ 2.3
SSBP3-204ENST00000371320 CA12O43570 354 aa29.4■■■□□ 2.3
SSBP3-204ENST00000371320 GEMP55040 296 aa29.4■■■□□ 2.3
SSBP3-204ENST00000371320 SCUBE1Q8IWY4 988 aa29.4■■■□□ 2.3
SSBP3-204ENST00000371320 RHOJQ9H4E5 214 aa29.4■■■□□ 2.3
SSBP3-204ENST00000371320 NMUR1Q9HB89 426 aa29.4■■■□□ 2.3
SSBP3-204ENST00000371320 STOML1Q9UBI4 398 aa29.4■■■□□ 2.3
SSBP3-204ENST00000371320 CDY1Q9Y6F8 540 aa29.4■■■□□ 2.3
SSBP3-204ENST00000371320 ZNF195O14628 629 aa29.4■■■□□ 2.3
SSBP3-204ENST00000371320 SIN3BO75182 1162 aa29.4■■■□□ 2.3
SSBP3-204ENST00000371320 KRT36O76013 467 aa29.4■■■□□ 2.3
SSBP3-204ENST00000371320 HSPA4LO95757 839 aa29.4■■■□□ 2.3
SSBP3-204ENST00000371320 CCND3P30281 292 aaPredicted RBP29.4■■■□□ 2.3
SSBP3-204ENST00000371320 FAM26DQ5JW98 314 aa29.4■■■□□ 2.3
SSBP3-204ENST00000371320 CCSAPQ6IQ19 270 aaPredicted RBP29.4■■■□□ 2.3
SSBP3-204ENST00000371320 C1orf21Q9H246 121 aa29.4■■■□□ 2.3
SSBP3-204ENST00000371320 ABI2Q9NYB9 513 aaPredicted RBP29.4■■■□□ 2.3
SSBP3-204ENST00000371320 ANKRD6Q9Y2G4 727 aa29.4■■■□□ 2.3
SSBP3-204ENST00000371320 E9PAM4 449 aa29.39■■■□□ 2.3
SSBP3-204ENST00000371320 TRIM13O60858 407 aa29.39■■■□□ 2.3
SSBP3-204ENST00000371320 PSMG1O95456 288 aa29.39■■■□□ 2.3
SSBP3-204ENST00000371320 MYL4P12829 197 aa29.39■■■□□ 2.3
SSBP3-204ENST00000371320 SAT1P21673 171 aa29.39■■■□□ 2.3
SSBP3-204ENST00000371320 PRKCZQ05513 592 aa29.39■■■□□ 2.3
SSBP3-204ENST00000371320 TRIM71Q2Q1W2 868 aaKnown RBP29.39■■■□□ 2.3
SSBP3-204ENST00000371320 ARTNQ5T4W7 220 aa29.39■■■□□ 2.3
SSBP3-204ENST00000371320 DENND5AQ6IQ26 1287 aa29.39■■■□□ 2.3
SSBP3-204ENST00000371320 TIGD7Q6NT04 549 aaPredicted RBP29.39■■■□□ 2.3
SSBP3-204ENST00000371320 NAPRTQ6XQN6 538 aa29.39■■■□□ 2.3
SSBP3-204ENST00000371320 GPATCH11Q8N954 259 aa29.39■■■□□ 2.3
SSBP3-204ENST00000371320 PPHLN1Q8NEY8 458 aaKnown RBP29.39■■■□□ 2.3
SSBP3-204ENST00000371320 PPP1R2P1Q96PQ5 205 aa29.39■■■□□ 2.3
SSBP3-204ENST00000371320 RBM22Q9NW64 420 aaKnown RBP eCLIP29.39■■■□□ 2.3
SSBP3-204ENST00000371320 MID2Q9UJV3 735 aa29.39■■■□□ 2.3
SSBP3-204ENST00000371320 HS3ST4Q9Y661 456 aa29.39■■■□□ 2.3
SSBP3-204ENST00000371320 KCNU1A8MYU2 1149 aa29.38■■■□□ 2.29
SSBP3-204ENST00000371320 TMEM114B3SHH9 223 aa29.38■■■□□ 2.29
SSBP3-204ENST00000371320 TM7SF2O76062 418 aa29.38■■■□□ 2.29
SSBP3-204ENST00000371320 USP10Q14694 798 aaKnown RBP29.38■■■□□ 2.29
SSBP3-204ENST00000371320 VWA5B1Q5TIE3 1220 aa29.38■■■□□ 2.29
SSBP3-204ENST00000371320 GLB1LQ6UWU2 654 aa29.38■■■□□ 2.29
SSBP3-204ENST00000371320 PAXIP1Q6ZW49 1069 aaPredicted RBP29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms