RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 SLAIN1Q8ND83 568 aa13.07□□□□□ -0.32
GPC3-201ENST00000370818 HIC2Q96JB3 615 aa13.07□□□□□ -0.32
GPC3-201ENST00000370818 AGAP3Q96P47 875 aa13.07□□□□□ -0.32
GPC3-201ENST00000370818 ZNF184Q99676 751 aaPredicted RBP13.07□□□□□ -0.32
GPC3-201ENST00000370818 LBHD1Q9BQE6 289 aaPredicted RBP13.07□□□□□ -0.32
GPC3-201ENST00000370818 VPS11Q9H270 941 aa13.07□□□□□ -0.32
GPC3-201ENST00000370818 SYBUQ9NX95 663 aa13.07□□□□□ -0.32
GPC3-201ENST00000370818 TTC3P53804 2025 aa13.07□□□□□ -0.32
GPC3-201ENST00000370818 WDR91A4D1P6 747 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 USP12O75317 370 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 AP2A1O95782 977 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 ETS2P15036 469 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 HOXC13P31276 330 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 GRK4P32298 578 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 GATMP50440 423 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 NIPAL4Q0D2K0 466 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 SPDYAQ5MJ70 313 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 BRMS1LQ5PSV4 323 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 KCTD11Q693B1 232 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 DCP1BQ8IZD4 617 aaKnown RBP13.06□□□□□ -0.32
GPC3-201ENST00000370818 TTC9BQ8N6N2 239 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 PPFIBP2Q8ND30 876 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 OR52K1Q8NGK4 314 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 TTC17Q96AE7 1141 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 FUBP3Q96I24 572 aaKnown RBP eCLIP13.06□□□□□ -0.321e-6■□□□□ 9.9
GPC3-201ENST00000370818 B3GALT6Q96L58 329 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 PGLYRP2Q96PD5 576 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 FAM193BQ96PV7 902 aaPredicted RBP13.06□□□□□ -0.32
GPC3-201ENST00000370818 CCDC28BQ9BUN5 200 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 MLPHQ9BV36 600 aaPredicted RBP13.06□□□□□ -0.32
GPC3-201ENST00000370818 GBA3Q9H227 469 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 SLC17A6Q9P2U8 582 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 HCSTQ9UBK5 93 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 SYN3O14994 580 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 MTSS1O43312 755 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 ZNF189O75820 626 aaPredicted RBP13.06□□□□□ -0.32
GPC3-201ENST00000370818 PSMG1O95456 288 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 COL6A1P12109 1028 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 PGAM1P18669 254 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 CCR1P32246 355 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 SEPT7Q16181 437 aaKnown RBP13.06□□□□□ -0.32
GPC3-201ENST00000370818 TAF1BQ53T94 588 aaPredicted RBP13.06□□□□□ -0.32
GPC3-201ENST00000370818 RWDD4Q6NW29 188 aaKnown RBP13.06□□□□□ -0.32
GPC3-201ENST00000370818 ARHGAP12Q8IWW6 846 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 FAM126BQ8IXS8 530 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 DTX3LQ8TDB6 740 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 CASD1Q96PB1 797 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 FAM111AQ96PZ2 611 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 TUBGCP5Q96RT8 1024 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 SRPK1Q96SB4 655 aaKnown RBP13.06□□□□□ -0.32
GPC3-201ENST00000370818 SLX1AQ9BQ83 275 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 GPR62Q9BZJ7 368 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 STX18Q9P2W9 335 aaKnown RBP13.06□□□□□ -0.32
GPC3-201ENST00000370818 ADAM28Q9UKQ2 775 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 SCML2Q9UQR0 700 aa13.06□□□□□ -0.32
GPC3-201ENST00000370818 KCNU1A8MYU2 1149 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 MAP3K7O43318 606 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 HNRNPRO43390 633 aaKnown RBP13.05□□□□□ -0.32
GPC3-201ENST00000370818 PFDN1O60925 122 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 KRT38O76015 456 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 MRPL58Q14197 206 aaKnown RBP13.05□□□□□ -0.32
GPC3-201ENST00000370818 NFE2Q16621 373 aaPredicted RBP13.05□□□□□ -0.32
GPC3-201ENST00000370818 TCTN1Q2MV58 587 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 PLEKHG4Q58EX7 1191 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 LGSNQ5TDP6 509 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 ARHGAP36Q6ZRI8 547 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 OTOAQ7RTW8 1153 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 NUP93Q8N1F7 819 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 ATAD1Q8NBU5 361 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 ZNF419Q96HQ0 510 aaPredicted RBP13.05□□□□□ -0.32
GPC3-201ENST00000370818 FCRL2Q96LA5 508 aaPredicted RBP13.05□□□□□ -0.32
GPC3-201ENST00000370818 C8orf48Q96LL4 319 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 TEKT5Q96M29 485 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 ELAC1Q9H777 363 aaKnown RBP13.05□□□□□ -0.32
GPC3-201ENST00000370818 ALG13Q9NP73 1137 aaKnown RBP13.05□□□□□ -0.32
GPC3-201ENST00000370818 RHBDL2Q9NX52 303 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 TRHDEQ9UKU6 1024 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 JCHAINP01591 159 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 ASLP04424 464 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 CCDC166P0CW27 439 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 NFKB1P19838 968 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 PPP2R5DQ14738 602 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 MROH9Q5TGP6 573 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 FAM171A1Q5VUB5 890 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 CES3Q6UWW8 571 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 MARK2Q7KZI7 788 aaKnown RBP13.05□□□□□ -0.32
GPC3-201ENST00000370818 CNTD1Q8N815 330 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 C10orf82Q8WW14 230 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 MTBPQ96DY7 904 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 VAT1Q99536 393 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 NAT9Q9BTE0 207 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 NDFIP2Q9NV92 336 aa13.05□□□□□ -0.32
GPC3-201ENST00000370818 MRPL42Q9Y6G3 142 aaKnown RBP13.05□□□□□ -0.32
GPC3-201ENST00000370818 NUP205Q92621 2012 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.04□□□□□ -0.32
GPC3-201ENST00000370818 COPEO14579 308 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 GSC2O15499 205 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 CTC1Q2NKJ3 1217 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 CTXN3Q4LDR2 81 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 MON1AQ86VX9 555 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms