RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 GLOD4Q9HC38 313 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 H0Y626 953 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 KDELR3O43731 214 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 BANF1O75531 89 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 FSHRP23945 695 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 ETFBP38117 255 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 LMAN1P49257 510 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 SLC10A7Q0GE19 358 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 FSCBQ5H9T9 825 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 MARC1Q5VT66 337 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 DENND2CQ68D51 928 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 KCTD11Q693B1 232 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 IL31Q6EBC2 164 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 NPAS3Q8IXF0 933 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 ZBED8Q8IZ13 594 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 DDI1Q8WTU0 396 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 NSMCE1Q8WV22 266 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 PABPC5Q96DU9 382 aaKnown RBP24.35■■□□□ 1.49
SNX3-203ENST00000368979 C9orf72Q96LT7 481 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 WDR83Q9BRX9 315 aaKnown RBP24.35■■□□□ 1.49
SNX3-203ENST00000368979 LMCD1Q9NZU5 365 aa24.35■■□□□ 1.49
SNX3-203ENST00000368979 ERI2A8K979 691 aaKnown RBP24.34■■□□□ 1.49
SNX3-203ENST00000368979 SUN1O94901 812 aa24.34■■□□□ 1.49
SNX3-203ENST00000368979 AP2A1O95782 977 aa24.34■■□□□ 1.49
SNX3-203ENST00000368979 OXCT1P55809 520 aa24.34■■□□□ 1.49
SNX3-203ENST00000368979 SLC29A2Q14542 456 aa24.34■■□□□ 1.49
SNX3-203ENST00000368979 KYNUQ16719 465 aa24.34■■□□□ 1.49
SNX3-203ENST00000368979 TMCO4Q5TGY1 634 aa24.34■■□□□ 1.49
SNX3-203ENST00000368979 FYB2Q5VWT5 728 aa24.34■■□□□ 1.49
SNX3-203ENST00000368979 RNF219Q5W0B1 726 aaPredicted RBP24.34■■□□□ 1.49
SNX3-203ENST00000368979 TPGS1Q6ZTW0 290 aa24.34■■□□□ 1.49
SNX3-203ENST00000368979 OTOP3Q7RTS5 596 aa24.34■■□□□ 1.49
SNX3-203ENST00000368979 WFDC5Q8TCV5 224 aa24.34■■□□□ 1.49
SNX3-203ENST00000368979 APOL5Q9BWW9 433 aa24.34■■□□□ 1.49
SNX3-203ENST00000368979 XAB2Q9HCS7 855 aaKnown RBP24.34■■□□□ 1.49
SNX3-203ENST00000368979 ATP13A1Q9HD20 1204 aa24.34■■□□□ 1.49
SNX3-203ENST00000368979 TBC1D14Q9P2M4 693 aa24.34■■□□□ 1.49
SNX3-203ENST00000368979 LAMA3Q16787 3333 aa24.33■■□□□ 1.49
SNX3-203ENST00000368979 MLNP12872 115 aa24.33■■□□□ 1.49
SNX3-203ENST00000368979 SARNPP82979 210 aaKnown RBP24.33■■□□□ 1.49
SNX3-203ENST00000368979 ADAM15Q13444 863 aa24.33■■□□□ 1.49
SNX3-203ENST00000368979 CDH18Q13634 790 aa24.33■■□□□ 1.49
SNX3-203ENST00000368979 PRPSAP1Q14558 356 aa24.33■■□□□ 1.49
SNX3-203ENST00000368979 LBRQ14739 615 aaKnown RBP24.33■■□□□ 1.49
SNX3-203ENST00000368979 LRIT3Q3SXY7 679 aa24.33■■□□□ 1.49
SNX3-203ENST00000368979 BBS9Q3SYG4 887 aa24.33■■□□□ 1.49
SNX3-203ENST00000368979 MFN1Q8IWA4 741 aa24.33■■□□□ 1.49
SNX3-203ENST00000368979 CELF5Q8N6W0 485 aaKnown RBP24.33■■□□□ 1.49
SNX3-203ENST00000368979 KIAA1958Q8N8K9 716 aa24.33■■□□□ 1.49
SNX3-203ENST00000368979 OXNAD1Q96HP4 312 aaPredicted RBP24.33■■□□□ 1.49
SNX3-203ENST00000368979 TTC25Q96NG3 672 aa24.33■■□□□ 1.49
SNX3-203ENST00000368979 MUC3BQ9H195 1237 aa24.33■■□□□ 1.49
SNX3-203ENST00000368979 OR51B4Q9Y5P0 310 aa24.33■■□□□ 1.49
SNX3-203ENST00000368979 AVILO75366 819 aa24.32■■□□□ 1.48
SNX3-203ENST00000368979 NEBLO76041 1014 aa24.32■■□□□ 1.48
SNX3-203ENST00000368979 ACSL3O95573 720 aa24.32■■□□□ 1.48
SNX3-203ENST00000368979 CYBBP04839 570 aa24.32■■□□□ 1.48
SNX3-203ENST00000368979 GRIA1P42261 906 aa24.32■■□□□ 1.48
SNX3-203ENST00000368979 MMP13P45452 471 aa24.32■■□□□ 1.48
SNX3-203ENST00000368979 FAM193AP78312 1265 aa24.32■■□□□ 1.48
SNX3-203ENST00000368979 MTM1Q13496 603 aa24.32■■□□□ 1.48
SNX3-203ENST00000368979 LRRC8BQ6P9F7 803 aa24.32■■□□□ 1.48
SNX3-203ENST00000368979 AGGF1Q8N302 714 aaeCLIP24.32■■□□□ 1.48
SNX3-203ENST00000368979 OR2W6PQ8NHA6 318 aa24.32■■□□□ 1.48
SNX3-203ENST00000368979 BHMTQ93088 406 aa24.32■■□□□ 1.48
SNX3-203ENST00000368979 OTUB2Q96DC9 234 aa24.32■■□□□ 1.48
SNX3-203ENST00000368979 PPP1R2P1Q96PQ5 205 aa24.32■■□□□ 1.48
SNX3-203ENST00000368979 RUFY1Q96T51 708 aa24.32■■□□□ 1.48
SNX3-203ENST00000368979 SPON2Q9BUD6 331 aa24.32■■□□□ 1.48
SNX3-203ENST00000368979 CDH22Q9UJ99 828 aa24.32■■□□□ 1.48
SNX3-203ENST00000368979 HOXB8P17481 243 aaPredicted RBP24.31■■□□□ 1.48
SNX3-203ENST00000368979 GLDCP23378 1020 aa24.31■■□□□ 1.48
SNX3-203ENST00000368979 MZF1P28698 734 aaPredicted RBP24.31■■□□□ 1.48
SNX3-203ENST00000368979 HP1BP3Q5SSJ5 553 aaPredicted RBP24.31■■□□□ 1.48
SNX3-203ENST00000368979 FBXO36Q8NEA4 188 aa24.31■■□□□ 1.48
SNX3-203ENST00000368979 FGF13Q92913 245 aa24.31■■□□□ 1.48
SNX3-203ENST00000368979 ALG14Q96F25 216 aa24.31■■□□□ 1.48
SNX3-203ENST00000368979 SH3GL2Q99962 352 aa24.31■■□□□ 1.48
SNX3-203ENST00000368979 NT5MQ9NPB1 228 aa24.31■■□□□ 1.48
SNX3-203ENST00000368979 AAR2Q9Y312 384 aaKnown RBP24.31■■□□□ 1.48
SNX3-203ENST00000368979 TTLL3Q9Y4R7 772 aa24.31■■□□□ 1.48
SNX3-203ENST00000368979 TEX264Q9Y6I9 313 aa24.31■■□□□ 1.48
SNX3-203ENST00000368979 GOLGA6CA6NDK9 693 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 PSMD3O43242 534 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 PENKP01210 267 aaPredicted RBP24.3■■□□□ 1.48
SNX3-203ENST00000368979 SHBGP04278 402 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 ABHD2P08910 425 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 GOLGA6DP0CG33 693 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 CSKP41240 450 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 NUMBP49757 651 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 EIF3BP55884 814 aaKnown RBP24.3■■□□□ 1.48
SNX3-203ENST00000368979 CCDC38Q502W7 563 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 DNAJC21Q5F1R6 531 aaKnown RBP24.3■■□□□ 1.48
SNX3-203ENST00000368979 LEKR1Q6ZMV7 388 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 ANKMY2Q8IV38 441 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 PGBD5Q8N414 524 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 ZBTB9Q96C00 473 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 LRRC39Q96DD0 335 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 ASB16Q96NS5 453 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 FEM1AQ9BSK4 669 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms