RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 LSSP48449 732 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 FNTAP49354 379 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 SLC25A11Q02978 314 aaKnown RBP9.05□□□□□ -0.96
TPM3-213ENST00000368545 DHX34Q14147 1143 aaKnown RBP9.05□□□□□ -0.96
TPM3-213ENST00000368545 GALEQ14376 348 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 CYP1B1Q16678 543 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 FAM171BQ6P995 826 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 PIGZQ86VD9 579 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 CCDC50Q8IVM0 306 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 LRRC43Q8N309 656 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 EMC1Q8N766 993 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 CLRN3Q8NCR9 226 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 TMEM175Q9BSA9 504 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 B3GNT5Q9BYG0 378 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 LRRC4Q9HBW1 653 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 VWA8A3KMH1 1905 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 KRBA1A5PL33 1030 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 M0R082 166 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 RAD51CO43502 376 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 HSF2BPO75031 334 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 KRT1P04264 644 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 ITGB1P05556 798 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 GLI1P08151 1106 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 LCP1P13796 627 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 GJC1P36383 396 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 PTPN9P43378 593 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 RECQLP46063 649 aaPredicted RBP9.05□□□□□ -0.96
TPM3-213ENST00000368545 RNF4P78317 190 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 ELAVL2Q12926 359 aaKnown RBP9.05□□□□□ -0.96
TPM3-213ENST00000368545 GBX1Q14549 363 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 DPY19L1Q2PZI1 675 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 INO80DQ53TQ3 878 aaPredicted RBP9.05□□□□□ -0.96
TPM3-213ENST00000368545 DAB2IPQ5VWQ8 1189 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 AADACL2Q6P093 401 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 C4orf50Q6ZRC1 276 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 PAQR9Q6ZVX9 377 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 IFT20Q8IY31 132 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 EIF1ADQ8N9N8 165 aaKnown RBP9.05□□□□□ -0.96
TPM3-213ENST00000368545 C1orf162Q8NEQ5 155 aaPredicted RBP9.05□□□□□ -0.96
TPM3-213ENST00000368545 ZNF417Q8TAU3 575 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 RXFP2Q8WXD0 754 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 MYLPFQ96A32 169 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 SCYL1Q96KG9 808 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 ZNF587Q96SQ5 575 aaPredicted RBP9.05□□□□□ -0.96
TPM3-213ENST00000368545 COLEC11Q9BWP8 271 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 TMPRSS13Q9BYE2 586 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 PRDM14Q9GZV8 571 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 DDX47Q9H0S4 455 aaKnown RBP9.05□□□□□ -0.96
TPM3-213ENST00000368545 RAB17Q9H0T7 212 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 NRDE2Q9H7Z3 1164 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 CSNK1G1Q9HCP0 422 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 PNPLA8Q9NP80 782 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 RASAL2Q9UJF2 1139 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 ADAM28Q9UKQ2 775 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 FBXO4Q9UKT5 387 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 USP18Q9UMW8 372 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 MYBPHLA2RUH7 354 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 I3L4J1 428 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 PIK3R2O00459 728 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 CLDN5O00501 218 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 ATP8B1O43520 1251 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 B4GALT3O60512 393 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 TADA2AO75478 443 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 OAZ2O95190 189 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 LPOP22079 712 aaPredicted RBP9.04□□□□□ -0.96
TPM3-213ENST00000368545 ADIGQ0VDE8 80 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 TFDP3Q5H9I0 405 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 ARMCX6Q7L4S7 300 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 ZC3H7AQ8IWR0 971 aaKnown RBP9.04□□□□□ -0.96
TPM3-213ENST00000368545 CMTR2Q8IYT2 770 aaKnown RBP9.04□□□□□ -0.96
TPM3-213ENST00000368545 SIX6OS1Q8N1H7 587 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.04□□□□□ -0.961e-8■■■■■ 76.2
TPM3-213ENST00000368545 PIWIL1Q96J94 861 aaKnown RBP9.04□□□□□ -0.96
TPM3-213ENST00000368545 SLITRK1Q96PX8 696 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 PKMYT1Q99640 499 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 OSBPL8Q9BZF1 889 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 CNGB3Q9NQW8 809 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 C14orf119Q9NWQ9 140 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 CLEC1BQ9P126 229 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 DNAJB4Q9UDY4 337 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 PCYOX1Q9UHG3 505 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 UTP11Q9Y3A2 253 aaKnown RBP9.04□□□□□ -0.96
TPM3-213ENST00000368545 SF3B1O75533 1304 aaKnown RBP eCLIP9.04□□□□□ -0.96
TPM3-213ENST00000368545 TBKBP1A7MCY6 615 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 HMGB1P1B2RPK0 211 aaPredicted RBP9.04□□□□□ -0.96
TPM3-213ENST00000368545 NRP1O14786 923 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 PRPSAP2O60256 369 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 RNGTTO60942 597 aaKnown RBP9.04□□□□□ -0.96
TPM3-213ENST00000368545 DEAF1O75398 565 aaPredicted RBP9.04□□□□□ -0.96
TPM3-213ENST00000368545 DAB1O75553 588 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 TJP3O95049 919 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 ALDH2P05091 517 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 MAP3K7CLP57077 242 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 DR1Q01658 176 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 TCTN1Q2MV58 587 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 CCDC14Q49A88 953 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 RAB41Q5JT25 222 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 ACBD5Q5T8D3 534 aaPredicted RBP9.04□□□□□ -0.96
TPM3-213ENST00000368545 ERAP2Q6P179 960 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 VSIG1Q86XK7 387 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms