RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 A0A0A0MRY4 1105 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 C15orf38-AP3S2A0A0A6YYH1 394 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 IGKV6-21A0A0C4DH24 114 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 CASTOR2A6NHX0 329 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 SCAMP3O14828 347 aaKnown RBP9.04□□□□□ -0.96
THBS3-201ENST00000368378 HBP1O60381 514 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 HNRNPCL1O60812 293 aaKnown RBP9.04□□□□□ -0.96
THBS3-201ENST00000368378 CLIC3O95833 236 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 UGT1A6P19224 532 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 EDNRBP24530 442 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 CA8P35219 290 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 GABRB2P47870 512 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 ALDH1A3P47895 512 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 TKTL1P51854 596 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 CDH13P55290 713 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 KLF10Q13118 480 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 LAMC2Q13753 1193 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 KRT72Q14CN4 511 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 PDK2Q15119 407 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 LSM12Q3MHD2 195 aaKnown RBP9.04□□□□□ -0.96
THBS3-201ENST00000368378 WSCD1Q658N2 575 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 ARPINQ7Z6K5 226 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 FAM110BQ8TC76 370 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 GATA6Q92908 595 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 SPATA13Q96N96 652 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 DCUN1D5Q9BTE7 237 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 NMRAL1Q9HBL8 299 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 MTMR10Q9NXD2 777 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 SLC2A6Q9UGQ3 507 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 ZDHHC2Q9UIJ5 367 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 FAM159BA6NKW6 160 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 E7ENQ6 273 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 NRP1O14786 923 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 TSPAN1O60635 241 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 ATP6V1G1O75348 118 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 SUPT3HO75486 399 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 TGDSO95455 350 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 C22orf31O95567 290 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 PRKCHP24723 683 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 CDH15P55291 814 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 MPP3Q13368 585 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 MSLNQ13421 630 aaPredicted RBP9.03□□□□□ -0.96
THBS3-201ENST00000368378 PPP1R3AQ16821 1122 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 LIN52Q52LA3 116 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 SDHAF4Q5VUM1 108 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 CLEC6AQ6EIG7 209 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 KCNMB4Q86W47 210 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 MYO1HQ8N1T3 1032 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 ATP6V1E2Q96A05 226 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 EME1Q96AY2 570 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 ZIC5Q96T25 663 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 CENPKQ9BS16 269 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 ULBP1Q9BZM6 244 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 MKS1Q9NXB0 559 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 FBXO9Q9UK97 447 aaPredicted RBP9.03□□□□□ -0.96
THBS3-201ENST00000368378 ARHGAP26Q9UNA1 814 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 PTGDR2Q9Y5Y4 395 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 SHROOM3Q8TF72 1996 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 A0A0C4DFX4 3053 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 CARNS1A5YM72 827 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 YJEFN3A6XGL0 299 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 KCNU1A8MYU2 1149 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 GAS2O43903 313 aaKnown RBP9.03□□□□□ -0.96
THBS3-201ENST00000368378 ENDOD1O94919 500 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 C1QAP02745 245 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 CPOXP36551 454 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 BEX3Q00994 111 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 MS4A2Q01362 244 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 TLR1Q15399 786 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 DBN1Q16643 649 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 ANO4Q32M45 955 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 TMEM259Q4ZIN3 620 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 SCIMPQ6UWF3 145 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 TFAP2DQ7Z6R9 452 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 OR6P1Q8NGX9 317 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 URGCPQ8TCY9 931 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 ARNTL2Q8WYA1 636 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 CMTM5Q96DZ9 223 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 ELMO2Q96JJ3 720 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 VCX3BQ9H321 246 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 MMADHCQ9H3L0 296 aaPredicted RBP9.03□□□□□ -0.96
THBS3-201ENST00000368378 XPR1Q9UBH6 696 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 EGFL7Q9UHF1 273 aa9.03□□□□□ -0.96
THBS3-201ENST00000368378 NCF1BA6NI72 391 aaPredicted RBP9.02□□□□□ -0.96
THBS3-201ENST00000368378 NCF1CA8MVU1 366 aaPredicted RBP9.02□□□□□ -0.96
THBS3-201ENST00000368378 MSI1O43347 362 aaKnown RBP9.02□□□□□ -0.96
THBS3-201ENST00000368378 AHCYL1O43865 530 aa9.02□□□□□ -0.96
THBS3-201ENST00000368378 HUS1O60921 280 aa9.02□□□□□ -0.96
THBS3-201ENST00000368378 PRKCGP05129 697 aa9.02□□□□□ -0.96
THBS3-201ENST00000368378 FESP07332 822 aa9.02□□□□□ -0.96
THBS3-201ENST00000368378 NCF1P14598 390 aaPredicted RBP9.02□□□□□ -0.96
THBS3-201ENST00000368378 PTPN1P18031 435 aaKnown RBP9.02□□□□□ -0.96
THBS3-201ENST00000368378 GARSP41250 739 aaKnown RBP9.02□□□□□ -0.96
THBS3-201ENST00000368378 ZNF157P51786 506 aaPredicted RBP9.02□□□□□ -0.96
THBS3-201ENST00000368378 ROR2Q01974 943 aaKnown RBP9.02□□□□□ -0.96
THBS3-201ENST00000368378 SOX4Q06945 474 aaPredicted RBP9.02□□□□□ -0.96
THBS3-201ENST00000368378 ZBTB17Q13105 803 aa9.02□□□□□ -0.96
THBS3-201ENST00000368378 MTHFD1LQ6UB35 978 aa9.02□□□□□ -0.96
THBS3-201ENST00000368378 PLPPR4Q7Z2D5 763 aa9.02□□□□□ -0.96
THBS3-201ENST00000368378 TMC7Q7Z402 723 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms