RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 GPR88Q9GZN0 384 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 TAS2R13Q9NYV9 303 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 ZNF180Q9UJW8 692 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 MYH13Q9UKX3 1938 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 CYP2C18P33260 490 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 RHOAP61586 193 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 FRG1Q14331 258 aaKnown RBP11.86□□□□□ -0.51
COPA-202ENST00000368069 SH3PXD2AQ5TCZ1 1133 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 CENPLQ8N0S6 344 aaPredicted RBP11.86□□□□□ -0.51
COPA-202ENST00000368069 ZFRQ96KR1 1074 aaKnown RBP11.86□□□□□ -0.51
COPA-202ENST00000368069 FOPNLQ96NB1 174 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 DDX18Q9NVP1 670 aaKnown RBP11.86□□□□□ -0.51
COPA-202ENST00000368069 CDH9Q9ULB4 789 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 RAD54BQ9Y620 910 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 ZNF541Q9H0D2 1346 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 KLRG2A4D1S0 409 aaPredicted RBP11.85□□□□□ -0.51
COPA-202ENST00000368069 MDM4O15151 490 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 TSPAN3O60637 253 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 KPNA6O60684 536 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 MLNP12872 115 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 IL1R2P27930 398 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 PIK3R1P27986 724 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 CD86P42081 329 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 DDX39BQ13838 428 aaKnown RBP11.85□□□□□ -0.51
COPA-202ENST00000368069 CCDC81Q6ZN84 652 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 OR9Q1Q8NGQ5 310 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 MYLPFQ96A32 169 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 ACOX2Q99424 681 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 ADGRE3Q9BY15 652 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 EIF2AQ9BY44 585 aaKnown RBP11.85□□□□□ -0.51
COPA-202ENST00000368069 GRIP2Q9C0E4 1043 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 SCN3BQ9NY72 215 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 VPS28Q9UK41 221 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 H7C4K7 107 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 BUD23O43709 281 aaKnown RBP11.85□□□□□ -0.51
COPA-202ENST00000368069 DEAF1O75398 565 aaPredicted RBP11.85□□□□□ -0.51
COPA-202ENST00000368069 HOXC6P09630 235 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 CHN2P52757 468 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 NRLP54845 237 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 DAB2P98082 770 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 PDK3Q15120 406 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 PPM1JQ5JR12 505 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 FAM35AQ86V20 835 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 NIPA2Q8N8Q9 360 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 PPTC7Q8NI37 304 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 C10orf82Q8WW14 230 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 CD101Q93033 1021 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 CADM1Q9BY67 442 aaKnown RBP11.85□□□□□ -0.51
COPA-202ENST00000368069 DERAQ9Y315 318 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 NUP98P52948 1817 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 DPYSL4O14531 572 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 PIGRP01833 764 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 C2P06681 752 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 ITGALP20701 1170 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 YWHAQP27348 245 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 PPP3CCP48454 512 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 PSME3P61289 254 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 C6orf89Q6UWU4 347 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 CCDC185Q8N715 623 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 FNDC5Q8NAU1 212 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 RP9Q8TA86 221 aaKnown RBP11.85□□□□□ -0.51
COPA-202ENST00000368069 LPPQ93052 612 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 NMRK2Q9NPI5 230 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 HMGXB4Q9UGU5 601 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 FAM32AQ9Y421 112 aaKnown RBP11.85□□□□□ -0.51
COPA-202ENST00000368069 TIAM2Q8IVF5 1701 aa11.85□□□□□ -0.51
COPA-202ENST00000368069 TSPAN1O60635 241 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 ALDH1A1P00352 501 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 RPLP2P05387 115 aaKnown RBP11.84□□□□□ -0.51
COPA-202ENST00000368069 MBL2P11226 248 aaPredicted RBP11.84□□□□□ -0.51
COPA-202ENST00000368069 PCBP1Q15365 356 aaKnown RBP eCLIP11.84□□□□□ -0.512e-6■■■■■ 36.4
COPA-202ENST00000368069 GSTA3Q16772 222 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 CYP51A1Q16850 503 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 OTUD3Q5T2D3 398 aaPredicted RBP11.84□□□□□ -0.51
COPA-202ENST00000368069 SLC26A9Q7LBE3 791 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 PIWIL4Q7Z3Z4 852 aaKnown RBP11.84□□□□□ -0.51
COPA-202ENST00000368069 PYROXD2Q8N2H3 581 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 PCDH19Q8TAB3 1148 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 NSMCE2Q96MF7 247 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 COPG2Q9UBF2 871 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 TCRBV7S3A2A0A539 114 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 ZNF839A8K0R7 811 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 BTN3A1O00481 513 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 KATNA1O75449 491 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 TM7SF2O76062 418 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 AKR1A1P14550 325 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 HNRNPLP14866 589 aaKnown RBP eCLIP11.84□□□□□ -0.51
COPA-202ENST00000368069 ITGB6P18564 788 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 FMO4P31512 558 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 ADRA1BP35368 520 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 ALDH7A1P49419 539 aaKnown RBP11.84□□□□□ -0.51
COPA-202ENST00000368069 KHDC1Q4VXA5 237 aaKnown RBP11.84□□□□□ -0.51
COPA-202ENST00000368069 AAGABQ6PD74 315 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 LGI2Q8N0V4 545 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 TOP6BLQ8N6T0 577 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 NAT8LQ8N9F0 302 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 RDH11Q8TC12 318 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 DDX1Q92499 740 aaKnown RBP11.84□□□□□ -0.51
COPA-202ENST00000368069 PDGFDQ9GZP0 370 aaPredicted RBP11.84□□□□□ -0.51
COPA-202ENST00000368069 WDR55Q9H6Y2 383 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms