RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 FAM228BP0C875 321 aa24.46■■□□□ 1.51
PFDN2-201ENST00000368010 HNRNPH3P31942 346 aaKnown RBP24.46■■□□□ 1.51
PFDN2-201ENST00000368010 FAM46CQ5VWP2 391 aa24.46■■□□□ 1.51
PFDN2-201ENST00000368010 ZCCHC9Q8N567 271 aaKnown RBP24.46■■□□□ 1.51
PFDN2-201ENST00000368010 AADATQ8N5Z0 425 aa24.46■■□□□ 1.51
PFDN2-201ENST00000368010 RTL3Q8N8U3 475 aaKnown RBP24.46■■□□□ 1.51
PFDN2-201ENST00000368010 SNX19Q92543 992 aa24.46■■□□□ 1.51
PFDN2-201ENST00000368010 ACE2Q9BYF1 805 aaPredicted RBP24.46■■□□□ 1.51
PFDN2-201ENST00000368010 MAGEH1Q9H213 219 aa24.46■■□□□ 1.51
PFDN2-201ENST00000368010 NEUROG2Q9H2A3 272 aa24.46■■□□□ 1.51
PFDN2-201ENST00000368010 ARHGAP20Q9P2F6 1191 aa24.46■■□□□ 1.51
PFDN2-201ENST00000368010 ZBTB32Q9Y2Y4 487 aaPredicted RBP24.46■■□□□ 1.51
PFDN2-201ENST00000368010 NYNRINQ9P2P1 1898 aaKnown RBP24.45■■□□□ 1.51
PFDN2-201ENST00000368010 A0A1B0GTW7 788 aa24.45■■□□□ 1.5
PFDN2-201ENST00000368010 SMAD6O43541 496 aaKnown RBP24.45■■□□□ 1.5
PFDN2-201ENST00000368010 GOT1P17174 413 aa24.45■■□□□ 1.5
PFDN2-201ENST00000368010 ACVRL1P37023 503 aa24.45■■□□□ 1.5
PFDN2-201ENST00000368010 MAPK8P45983 427 aa24.45■■□□□ 1.5
PFDN2-201ENST00000368010 SERPINH1P50454 418 aaKnown RBP24.45■■□□□ 1.5
PFDN2-201ENST00000368010 ATXN3P54252 364 aaPredicted RBP24.45■■□□□ 1.5
PFDN2-201ENST00000368010 ARF5P84085 180 aa24.45■■□□□ 1.5
PFDN2-201ENST00000368010 SEMA3BQ13214 749 aa24.45■■□□□ 1.5
PFDN2-201ENST00000368010 DAB2IPQ5VWQ8 1189 aa24.45■■□□□ 1.5
PFDN2-201ENST00000368010 C22orf39Q6P5X5 142 aa24.45■■□□□ 1.5
PFDN2-201ENST00000368010 VSTM4Q8IW00 320 aa24.45■■□□□ 1.5
PFDN2-201ENST00000368010 ARHGEF2Q92974 986 aaKnown RBP24.45■■□□□ 1.5
PFDN2-201ENST00000368010 NCAPGQ9BPX3 1015 aa24.45■■□□□ 1.5
PFDN2-201ENST00000368010 CATSPERBQ9H7T0 1116 aa24.45■■□□□ 1.5
PFDN2-201ENST00000368010 EIF2B4Q9UI10 523 aaKnown RBP24.45■■□□□ 1.5
PFDN2-201ENST00000368010 PPM1HQ9ULR3 514 aa24.45■■□□□ 1.5
PFDN2-201ENST00000368010 AP4E1Q9UPM8 1137 aa24.45■■□□□ 1.5
PFDN2-201ENST00000368010 GON4LQ3T8J9 2241 aa24.45■■□□□ 1.5
PFDN2-201ENST00000368010 CXorf51AA0A1B0GTR3 108 aa24.44■■□□□ 1.5
PFDN2-201ENST00000368010 FAM47DPA6NHR8 397 aa24.44■■□□□ 1.5
PFDN2-201ENST00000368010 LRRC72A6NJI9 287 aa24.44■■□□□ 1.5
PFDN2-201ENST00000368010 EIF3CLB5ME19 914 aaKnown RBP24.44■■□□□ 1.5
PFDN2-201ENST00000368010 CDX4O14627 284 aaPredicted RBP24.44■■□□□ 1.5
PFDN2-201ENST00000368010 PRPSAP2O60256 369 aa24.44■■□□□ 1.5
PFDN2-201ENST00000368010 FSBPO95073 299 aa24.44■■□□□ 1.5
PFDN2-201ENST00000368010 TPM1P09493 284 aa24.44■■□□□ 1.5
PFDN2-201ENST00000368010 HTR7P34969 479 aa24.44■■□□□ 1.5
PFDN2-201ENST00000368010 RECQLP46063 649 aaPredicted RBP24.44■■□□□ 1.5
PFDN2-201ENST00000368010 POLD3Q15054 466 aaPredicted RBP24.44■■□□□ 1.5
PFDN2-201ENST00000368010 KIAA0895LQ68EN5 471 aa24.44■■□□□ 1.5
PFDN2-201ENST00000368010 ALKBH5Q6P6C2 394 aaKnown RBP24.44■■□□□ 1.5
PFDN2-201ENST00000368010 ARFGAP1Q8N6T3 406 aa24.44■■□□□ 1.5
PFDN2-201ENST00000368010 OR2A12Q8NGT7 310 aa24.44■■□□□ 1.5
PFDN2-201ENST00000368010 BIRC7Q96CA5 298 aa24.44■■□□□ 1.5
PFDN2-201ENST00000368010 EIF3CQ99613 913 aaKnown RBP24.44■■□□□ 1.5
PFDN2-201ENST00000368010 CEP44Q9C0F1 390 aa24.44■■□□□ 1.5
PFDN2-201ENST00000368010 THAP2Q9H0W7 228 aa24.44■■□□□ 1.5
PFDN2-201ENST00000368010 DHX35Q9H5Z1 703 aaKnown RBP24.44■■□□□ 1.5
PFDN2-201ENST00000368010 FSCN3Q9NQT6 498 aa24.44■■□□□ 1.5
PFDN2-201ENST00000368010 GPATCH2LQ9NWQ4 482 aa24.44■■□□□ 1.5
PFDN2-201ENST00000368010 PCSK1NQ9UHG2 260 aa24.44■■□□□ 1.5
PFDN2-201ENST00000368010 HPCAL4Q9UM19 191 aa24.44■■□□□ 1.5
PFDN2-201ENST00000368010 FGF10O15520 208 aaPredicted RBP24.43■■□□□ 1.5
PFDN2-201ENST00000368010 SYPP08247 313 aa24.43■■□□□ 1.5
PFDN2-201ENST00000368010 MIPP30301 263 aa24.43■■□□□ 1.5
PFDN2-201ENST00000368010 GALCP54803 685 aa24.43■■□□□ 1.5
PFDN2-201ENST00000368010 GEMIN4P57678 1058 aaKnown RBP24.43■■□□□ 1.5
PFDN2-201ENST00000368010 TPI1P60174 286 aa24.43■■□□□ 1.5
PFDN2-201ENST00000368010 CCDC122Q5T0U0 273 aa24.43■■□□□ 1.5
PFDN2-201ENST00000368010 OR8K1Q8NGG5 319 aa24.43■■□□□ 1.5
PFDN2-201ENST00000368010 OR2T34Q8NGX1 318 aa24.43■■□□□ 1.5
PFDN2-201ENST00000368010 PIP4K2CQ8TBX8 421 aa24.43■■□□□ 1.5
PFDN2-201ENST00000368010 PEBP4Q96S96 227 aa24.43■■□□□ 1.5
PFDN2-201ENST00000368010 SNRNP25Q9BV90 132 aaKnown RBP24.43■■□□□ 1.5
PFDN2-201ENST00000368010 GTPBP2Q9BX10 602 aaKnown RBP24.43■■□□□ 1.5
PFDN2-201ENST00000368010 TNKS2Q9H2K2 1166 aa24.43■■□□□ 1.5
PFDN2-201ENST00000368010 SARDHQ9UL12 918 aa24.43■■□□□ 1.5
PFDN2-201ENST00000368010 WASH4PA8MWX3 477 aa24.42■■□□□ 1.5
PFDN2-201ENST00000368010 ARHGAP33O14559 1287 aa24.42■■□□□ 1.5
PFDN2-201ENST00000368010 BCAT2O15382 392 aaPredicted RBP24.42■■□□□ 1.5
PFDN2-201ENST00000368010 LRCH4O75427 683 aa24.42■■□□□ 1.5
PFDN2-201ENST00000368010 CHRNA3P32297 505 aa24.42■■□□□ 1.5
PFDN2-201ENST00000368010 DRD3P35462 400 aa24.42■■□□□ 1.5
PFDN2-201ENST00000368010 ADPRHP54922 357 aa24.42■■□□□ 1.5
PFDN2-201ENST00000368010 FOXK2Q01167 660 aa24.42■■□□□ 1.5
PFDN2-201ENST00000368010 ACAP1Q15027 740 aa24.42■■□□□ 1.5
PFDN2-201ENST00000368010 TSR1Q2NL82 804 aaKnown RBP24.42■■□□□ 1.5
PFDN2-201ENST00000368010 ERMARDQ5T6L9 678 aa24.42■■□□□ 1.5
PFDN2-201ENST00000368010 NCEH1Q6PIU2 408 aa24.42■■□□□ 1.5
PFDN2-201ENST00000368010 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.42■■□□□ 1.5
PFDN2-201ENST00000368010 ZNF354CQ86Y25 554 aa24.42■■□□□ 1.5
PFDN2-201ENST00000368010 PCDH20Q8N6Y1 951 aaKnown RBP24.42■■□□□ 1.5
PFDN2-201ENST00000368010 OR14C36Q8NHC7 312 aa24.42■■□□□ 1.5
PFDN2-201ENST00000368010 DNAJC7Q99615 494 aa24.42■■□□□ 1.5
PFDN2-201ENST00000368010 ZNHIT6Q9NWK9 470 aaKnown RBP24.42■■□□□ 1.5
PFDN2-201ENST00000368010 DONSONQ9NYP3 566 aa24.42■■□□□ 1.5
PFDN2-201ENST00000368010 TM4SF5O14894 197 aa24.41■■□□□ 1.5
PFDN2-201ENST00000368010 SLC7A4O43246 635 aa24.41■■□□□ 1.5
PFDN2-201ENST00000368010 CD27P26842 260 aa24.41■■□□□ 1.5
PFDN2-201ENST00000368010 EIF4A3P38919 411 aaKnown RBP24.41■■□□□ 1.5
PFDN2-201ENST00000368010 METAP1P53582 386 aa24.41■■□□□ 1.5
PFDN2-201ENST00000368010 YBEYP58557 167 aaPredicted RBP24.41■■□□□ 1.5
PFDN2-201ENST00000368010 CA9Q16790 459 aa24.41■■□□□ 1.5
PFDN2-201ENST00000368010 POM121L1PQ3SYA9 428 aa24.41■■□□□ 1.5
PFDN2-201ENST00000368010 PSTKQ8IV42 348 aaKnown RBP24.41■■□□□ 1.5
PFDN2-201ENST00000368010 FAM131CQ96AQ9 280 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms