RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 BTBD6Q96KE9 485 aa15.8■□□□□ 0.12
PRKN-203ENST00000366894 TMPRSS4Q9NRS4 437 aa15.8■□□□□ 0.12
PRKN-203ENST00000366894 DNAI1Q9UI46 699 aa15.8■□□□□ 0.12
PRKN-203ENST00000366894 INTS6Q9UL03 887 aaKnown RBP15.8■□□□□ 0.12
PRKN-203ENST00000366894 ALG6Q9Y672 507 aa15.8■□□□□ 0.12
PRKN-203ENST00000366894 RALGAPA1Q6GYQ0 2036 aa15.8■□□□□ 0.12
PRKN-203ENST00000366894 SPAG17Q6Q759 2223 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 TMEM110-MUSTN1A8MSY1 372 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 FAM72CH0Y354 149 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 PSTPIP1O43586 416 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 GDF9O60383 454 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 BCKDHBP21953 392 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 PRKCHP24723 683 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 SLC25A11Q02978 314 aaKnown RBP15.79■□□□□ 0.12
PRKN-203ENST00000366894 PTPRNQ16849 979 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 MAP7D1Q3KQU3 841 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 FUT11Q495W5 492 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 PLK5Q496M5 336 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 AASDHQ4L235 1098 aaPredicted RBP15.79■□□□□ 0.12
PRKN-203ENST00000366894 KCNT1Q5JUK3 1230 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 ARTNQ5T4W7 220 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 FAM72AQ5TYM5 149 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 FAM72DQ6L9T8 149 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 FAM72BQ86X60 149 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 CIR1Q86X95 450 aaPredicted RBP15.79■□□□□ 0.12
PRKN-203ENST00000366894 TMEM139Q8IV31 216 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 APCDD1Q8J025 514 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 PYROXD2Q8N2H3 581 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 BBS5Q8N3I7 341 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 ATP11CQ8NB49 1132 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 RLN3Q8WXF3 142 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 SPACA7Q96KW9 195 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 ZNF670Q9BS34 389 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 CEP44Q9C0F1 390 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 DUSP15Q9H1R2 295 aaPredicted RBP15.79■□□□□ 0.12
PRKN-203ENST00000366894 TMEM245Q9H330 911 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 OR51B4Q9Y5P0 310 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 SNX10Q9Y5X0 201 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 SDK1Q7Z5N4 2213 aa15.79■□□□□ 0.12
PRKN-203ENST00000366894 CNOT1A5YKK6 2376 aaKnown RBP15.78■□□□□ 0.12
PRKN-203ENST00000366894 CCDC66A2RUB6 948 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 CBX4O00257 560 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 KDELR3O43731 214 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 GOT1P17174 413 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 ERCC2P18074 760 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 NDUFV2P19404 249 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 MZF1P28698 734 aaPredicted RBP15.78■□□□□ 0.12
PRKN-203ENST00000366894 OXTRP30559 389 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 GGCXP38435 758 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 P2RY2P41231 377 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 IRAK1P51617 712 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 RAD51Q06609 339 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 SMTNL2Q2TAL5 461 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 HNRNPA1L2Q32P51 320 aaKnown RBP15.78■□□□□ 0.12
PRKN-203ENST00000366894 RAB6CQ53S08 254 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 INO80DQ53TQ3 878 aaPredicted RBP15.78■□□□□ 0.12
PRKN-203ENST00000366894 FAM46CQ5VWP2 391 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 ZNF662Q6ZS27 426 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 PLPP6Q8IY26 295 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 RCOR2Q8IZ40 523 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 OR2T3Q8NH03 318 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.78■□□□□ 0.12
PRKN-203ENST00000366894 CYB5D2Q8WUJ1 264 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 PRCCQ92733 491 aaPredicted RBP15.78■□□□□ 0.12
PRKN-203ENST00000366894 ARHGEF2Q92974 986 aaKnown RBP15.78■□□□□ 0.12
PRKN-203ENST00000366894 ALG14Q96F25 216 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 CALN1Q9BXU9 219 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 ACE2Q9BYF1 805 aaPredicted RBP15.78■□□□□ 0.12
PRKN-203ENST00000366894 RAB6CQ9H0N0 254 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 SLC6A17Q9H1V8 727 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 CWC15Q9P013 229 aaKnown RBP15.78■□□□□ 0.12
PRKN-203ENST00000366894 MBD1Q9UIS9 605 aaPredicted RBP15.78■□□□□ 0.12
PRKN-203ENST00000366894 AMFRQ9UKV5 643 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 HS3ST2Q9Y278 367 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 NCKAP1Q9Y2A7 1128 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 CEP295Q9C0D2 2601 aa15.78■□□□□ 0.12
PRKN-203ENST00000366894 CKAP5Q14008 2032 aa15.77■□□□□ 0.12
PRKN-203ENST00000366894 PLXND1Q9Y4D7 1925 aa15.77■□□□□ 0.12
PRKN-203ENST00000366894 ALOX15BO15296 676 aa15.77■□□□□ 0.12
PRKN-203ENST00000366894 ZSCAN12O43309 604 aa15.77■□□□□ 0.12
PRKN-203ENST00000366894 ATP9BO43861 1147 aa15.77■□□□□ 0.12
PRKN-203ENST00000366894 ZRANB2O95218 330 aaKnown RBP eCLIP15.77■□□□□ 0.12
PRKN-203ENST00000366894 MX2P20592 715 aa15.77■□□□□ 0.12
PRKN-203ENST00000366894 COMTP21964 271 aa15.77■□□□□ 0.12
PRKN-203ENST00000366894 MSNP26038 577 aaKnown RBP15.77■□□□□ 0.12
PRKN-203ENST00000366894 IL1R2P27930 398 aa15.77■□□□□ 0.12
PRKN-203ENST00000366894 LIMK1P53667 647 aa15.77■□□□□ 0.12
PRKN-203ENST00000366894 COPS2P61201 443 aa15.77■□□□□ 0.12
PRKN-203ENST00000366894 CAMK2GQ13555 558 aaPredicted RBP15.77■□□□□ 0.12
PRKN-203ENST00000366894 TFDP2Q14188 446 aa15.77■□□□□ 0.12
PRKN-203ENST00000366894 RFTN1Q14699 578 aaPredicted RBP15.77■□□□□ 0.12
PRKN-203ENST00000366894 TTC31Q49AM3 519 aaPredicted RBP15.77■□□□□ 0.12
PRKN-203ENST00000366894 SLC36A4Q6YBV0 504 aa15.77■□□□□ 0.12
PRKN-203ENST00000366894 UBL4BQ8N7F7 174 aa15.77■□□□□ 0.12
PRKN-203ENST00000366894 C12orf50Q8NA57 414 aaPredicted RBP15.77■□□□□ 0.12
PRKN-203ENST00000366894 TPCN2Q8NHX9 752 aa15.77■□□□□ 0.12
PRKN-203ENST00000366894 FAM71BQ8TC56 605 aa15.77■□□□□ 0.12
PRKN-203ENST00000366894 ISG20Q96AZ6 181 aaKnown RBP15.77■□□□□ 0.12
PRKN-203ENST00000366894 SIPA1Q96FS4 1042 aa15.77■□□□□ 0.12
PRKN-203ENST00000366894 MYO19Q96H55 970 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms