RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 CRNNQ9UBG3 495 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 KLF15Q9UIH9 416 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 ENDOD1O94919 500 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 PLATP00750 562 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 TTKP33981 857 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 BST2Q10589 180 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 GMIPQ9P107 970 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 EIF3LQ9Y262 564 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 HMGB3O15347 200 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 SERPINE1P05121 402 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 SPIRE1Q08AE8 756 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 NFYCQ13952 458 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 PFKFB3Q16875 520 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 PALB2Q86YC2 1186 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 RBM15BQ8NDT2 890 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 VPS33AQ96AX1 596 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 GPRASP2Q96D09 838 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 AP4E1Q9UPM8 1137 aa11.22□□□□□ -0.61
CDC42BPA-205ENST00000366769 UBE2Q2LH0YL09 131 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 SSX5O60225 188 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 TMEM253P0C7T8 217 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 RXRGP48443 463 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 AP1S2P56377 157 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 DCAF6Q58WW2 860 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 FAM196AQ6ZSG2 479 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 RNF149Q8NC42 400 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 SETD9Q8NE22 299 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 TMEM121Q9BTD3 319 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 HGH1Q9BTY7 390 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 NAGPAQ9UK23 515 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 NUP153P49790 1475 aaKnown RBP11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 TBX1O43435 398 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 RBMXL2O75526 392 aaKnown RBP11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 ECT2LQ008S8 904 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 STARD3Q14849 445 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 PQLC1Q8N2U9 271 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 CYP27B1O15528 508 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 RPL35P42766 123 aaKnown RBP11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 HNMTP50135 292 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 TAP1Q03518 808 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 TCEA2Q15560 299 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 TXNDC11Q6PKC3 985 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 XKR5Q6UX68 686 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 ARHGAP36Q6ZRI8 547 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 ERI1Q8IV48 349 aaKnown RBP11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 DLG3Q92796 817 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 MIA3Q5JRA6 1907 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 MT-ND1P03886 318 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 NPR3P17342 541 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 GP5P40197 560 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 PSME3P61289 254 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 FAM131AQ6UXB0 335 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 NLGN1Q8N2Q7 840 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 DCAF4Q8WV16 495 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 HEPHQ9BQS7 1158 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 PHF20Q9BVI0 1012 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 GRID1Q9ULK0 1009 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 DICER1Q9UPY3 1922 aaKnown RBP11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 OVOS2A0A0G2JMS6 1433 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 SVILO95425 2214 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 KBTBD13C9JR72 458 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 ADD2P35612 726 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 EFL1Q7Z2Z2 1120 aaKnown RBP11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 PMEPA1Q969W9 287 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 C12orf43Q96C57 262 aaKnown RBP11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 TMEM138Q9NPI0 162 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 ARHGAP20Q9P2F6 1191 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 CLEC4AQ9UMR7 237 aa11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 RPH3AQ9Y2J0 694 aaPredicted RBP11.21□□□□□ -0.61
CDC42BPA-205ENST00000366769 PRR5-ARHGAP8B1AHC4 643 aa11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 TCEA3O75764 348 aa11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 OR6B1O95007 311 aa11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 ARHGAP8P85298 464 aa11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 ATP6AP1LQ52LC2 224 aa11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 RALGPS1Q5JS13 557 aa11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 TTC23Q5W5X9 447 aa11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 RD3Q7Z3Z2 195 aa11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 MYDGFQ969H8 173 aa11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 ZNF669Q96BR6 464 aaPredicted RBP11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 EEF2KO00418 725 aaKnown RBP11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 APOL3O95236 402 aa11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 PENKP01210 267 aaPredicted RBP11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 FOSL1P15407 271 aa11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 HARS2P49590 506 aaKnown RBP11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 MAN2A2P49641 1150 aa11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 FGFR2P21802 821 aa11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 GPSM2P81274 684 aa11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 GARNL3Q5VVW2 1013 aa11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 ZNF613Q6PF04 617 aa11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 R3HCC1LQ7Z5L2 792 aaKnown RBP11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 SH3RF1Q7Z6J0 888 aa11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 ORAI2Q96SN7 254 aa11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 LXNQ9BS40 222 aa11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 KCTD10Q9H3F6 313 aa11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 DENND4BO75064 1496 aaPredicted RBP11.21□□□□□ -0.62
CDC42BPA-205ENST00000366769 UMPSP11172 480 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 ORC2Q13416 577 aaPredicted RBP11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 HIPK3Q9H422 1215 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms