RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 RP1P56715 2156 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 CRYBG3Q68DQ2 2970 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 ENO4A6NNW6 628 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 H3BQV1 296 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 PLD2O14939 933 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 SLC7A4O43246 635 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 TCEA3O75764 348 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 BMP15O95972 392 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 ALPPL2P10696 532 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 SFTPCP11686 197 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 NUDT1P36639 197 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 ETV5P41161 510 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 RAD23BP54727 409 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 ZNF445P59923 1031 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 HS1BP3Q53T59 392 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 DCAF6Q58WW2 860 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 JAMLQ86YT9 394 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 RBFAQ8N0V3 343 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 OR52K2Q8NGK3 314 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 TAS1R2Q8TE23 839 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 LIN37Q96GY3 246 aaPredicted RBP8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 PPP1R13BQ96KQ4 1090 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 FCRL2Q96LA5 508 aaPredicted RBP8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 HEXIM2Q96MH2 286 aaKnown RBP8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 SLC12A9Q9BXP2 914 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 UBXN6Q9BZV1 441 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 KBTBD4Q9NVX7 518 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 POLQO75417 2590 aa8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 SETD2Q9BYW2 2564 aaPredicted RBP8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 TDRD6O60522 2096 aaKnown RBP8.74□□□□□ -1.01
HMGB1P39-201ENST00000366304 C2CD3Q4AC94 2353 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 PRAMEF33A0A0G2JMD5 474 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 AQP9O43315 295 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 PRAMEF10O60809 474 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 LUC7L3O95232 432 aaKnown RBP8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 CSF2P04141 144 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 RPN1P04843 607 aaKnown RBP8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 FYNP06241 537 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 CELA2BP08218 269 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 LIPCP11150 499 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 P4HA1P13674 534 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 NME1P15531 152 aaKnown RBP8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 ITIH1P19827 911 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 PIK3CAP42336 1068 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 AFMP43652 599 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 AP3M2P53677 418 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 INHBCP55103 352 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 PPP3CAQ08209 521 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 ADIGQ0VDE8 80 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 EIF2B5Q13144 721 aaKnown RBP8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 KCNAB2Q13303 367 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 MORC3Q14149 939 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 NR0B2Q15466 257 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 TMEM259Q4ZIN3 620 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 MS4A13Q5J8X5 152 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 ERICH6BQ5W0A0 696 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 MSANTD2Q6P1R3 559 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 CCDC73Q6ZRK6 1079 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 STXBP4Q6ZWJ1 553 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 RAB11FIP2Q7L804 512 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 CIR1Q86X95 450 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 DTX1Q86Y01 620 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 FBXO39Q8N4B4 442 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 ZNF511Q8NB15 262 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 ANKRD52Q8NB46 1076 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 HJURPQ8NCD3 748 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 TAF4BQ92750 862 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 IFT43Q96FT9 208 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 SPAG5Q96R06 1193 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 CCDC3Q9BQI4 270 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 DUSP23Q9BVJ7 150 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 BOCQ9BWV1 1114 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 BACH2Q9BYV9 841 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 LRRC4CQ9HCJ2 640 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 EPB41L5Q9HCM4 733 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 PREBQ9HCU5 417 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 SLC39A2Q9NP94 309 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 OLA1Q9NTK5 396 aaKnown RBP8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 TFIP11Q9UBB9 837 aaKnown RBP8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 PISDQ9UG56 409 aa8.73□□□□□ -1.01
HMGB1P39-201ENST00000366304 SPTY2D1-AS1A0A0U1RR47 76 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 A0A1W2PQM1 296 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 NEMP2A6NFY4 417 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 C9orf172C9J069 976 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 PIK3R2O00459 728 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 NVLO15381 856 aaKnown RBP8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 IRAK2O43187 625 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 TRIM49P0CI25 452 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 TRIM49CP0CI26 452 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 UQCRFS1P47985 274 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 ARSDP51689 593 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 POLE2P56282 527 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 HNRNPKP61978 463 aaKnown RBP eCLIP8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 SNRPFP62306 86 aaKnown RBP8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 CEBPZQ03701 1054 aaKnown RBP8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 C1orf61Q13536 156 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 CDH18Q13634 790 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 NCAPHQ15003 741 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 MANEAQ5SRI9 462 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 ARHGAP17Q68EM7 881 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms