RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 TMEM71Q6P5X7 295 aa3.47□□□□□ -1.85
RNU4-48P-201ENST00000365559 PARM1Q6UWI2 310 aa3.47□□□□□ -1.85
RNU4-48P-201ENST00000365559 SLC16A12Q6ZSM3 486 aa3.47□□□□□ -1.85
RNU4-48P-201ENST00000365559 TRIM74Q86UV6 250 aa3.47□□□□□ -1.85
RNU4-48P-201ENST00000365559 TRIM73Q86UV7 250 aa3.47□□□□□ -1.85
RNU4-48P-201ENST00000365559 DPP10Q8N608 796 aa3.47□□□□□ -1.85
RNU4-48P-201ENST00000365559 C7orf57Q8NEG2 295 aa3.47□□□□□ -1.85
RNU4-48P-201ENST00000365559 HDAC7Q8WUI4 952 aa3.47□□□□□ -1.85
RNU4-48P-201ENST00000365559 FAR1Q8WVX9 515 aa3.47□□□□□ -1.85
RNU4-48P-201ENST00000365559 RNFT2Q96EX2 444 aa3.47□□□□□ -1.85
RNU4-48P-201ENST00000365559 FRG2BQ96QU4 278 aa3.47□□□□□ -1.85
RNU4-48P-201ENST00000365559 IFT27Q9BW83 186 aa3.47□□□□□ -1.85
RNU4-48P-201ENST00000365559 POLDIP3Q9BY77 421 aaKnown RBP3.47□□□□□ -1.85
RNU4-48P-201ENST00000365559 ISCUQ9H1K1 167 aa3.47□□□□□ -1.85
RNU4-48P-201ENST00000365559 RASSF1Q9NS23 344 aa3.47□□□□□ -1.85
RNU4-48P-201ENST00000365559 CDH22Q9UJ99 828 aa3.47□□□□□ -1.85
RNU4-48P-201ENST00000365559 RRP7AQ9Y3A4 280 aaKnown RBP3.47□□□□□ -1.85
RNU4-48P-201ENST00000365559 RAP2CQ9Y3L5 183 aa3.47□□□□□ -1.85
RNU4-48P-201ENST00000365559 MST1RQ04912 1400 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 TMEM247A6NEH6 219 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 GAGE12JA6NER3 117 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 DDTLA6NHG4 134 aaPredicted RBP3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 BECN2A8MW95 431 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 DHX16O60231 1041 aaKnown RBP3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 TMCC1O94876 653 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 SNHG28P0DPA3 235 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 CPA1P15085 419 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 CHRNB2P17787 502 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 CD72P21854 359 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 ARRB2P32121 409 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 GJC1P36383 396 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 PTPN9P43378 593 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 RFX5P48382 616 aaPredicted RBP3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 HTR6P50406 440 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 SELENOVP59797 346 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 TRAF1Q13077 416 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 INO80DQ53TQ3 878 aaPredicted RBP3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 FBXO47Q5MNV8 452 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 TBC1D9BQ66K14 1250 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 NAPEPLDQ6IQ20 393 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 SAMD14Q8IZD0 417 aaPredicted RBP3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 FAM185AQ8N0U4 392 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 HORMAD2Q8N7B1 307 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 ANKRD44Q8N8A2 993 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 SETD9Q8NE22 299 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 URB1-AS1Q96HZ7 61 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 TWNKQ96RR1 684 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 RBM38Q9H0Z9 239 aaKnown RBP3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 CXorf56Q9H5V9 222 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 NLKQ9UBE8 527 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 CD207Q9UJ71 328 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 INSL5Q9Y5Q6 135 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 SLC4A4Q9Y6R1 1079 aa3.46□□□□□ -1.86
RNU4-48P-201ENST00000365559 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 RPS10-NUDT3A0A1W2PQS6 291 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 VWA3AA6NCI4 1184 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 SAC3D1A6NKF1 404 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 STMND1H3BQB6 276 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 I6L893 689 aaPredicted RBP3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 KLK10O43240 276 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 KCNAB3O43448 404 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 STRNO43815 780 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 CBX6O95503 412 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 CNPP09543 421 aaKnown RBP3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 HOXA11P31270 313 aaPredicted RBP3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 HNF1BP35680 557 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 PPP3CCP48454 512 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 RASSF2P50749 326 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 PAPOLAP51003 745 aaKnown RBP3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 CLCNKBP51801 687 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 NANOS2P60321 138 aaKnown RBP3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 PPFIA1Q13136 1202 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 DUSP6Q16828 381 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 FBXO43Q4G163 708 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 TMEM268Q5VZI3 342 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 DENND1BQ6P3S1 775 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 Q6ZTK2 550 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 WDR5BQ86VZ2 330 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 CAMK1DQ8IU85 385 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 GABPB2Q8TAK5 448 aaPredicted RBP3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 CEP76Q8TAP6 659 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 NCSTNQ92542 709 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 TEFMQ96QE5 360 aaKnown RBP3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 PYM1Q9BRP8 204 aaKnown RBP3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 KLHL31Q9H511 634 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 STN1Q9H668 368 aaKnown RBP3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 MRPL44Q9H9J2 332 aaKnown RBP3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 NOD2Q9HC29 1040 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 DHDHQ9UQ10 334 aa3.45□□□□□ -1.86
RNU4-48P-201ENST00000365559 OR6C68A6NDL8 312 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 HSPB6O14558 160 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 SPTLC2O15270 562 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 RNMTO43148 476 aaKnown RBP3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 LCATP04180 440 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 CYP1A2P05177 515 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 CKMT1AP12532 417 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 TNNT1P13805 278 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 AVPR1AP37288 418 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 SKIV2L2P42285 1042 aaKnown RBP3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 DPP6P42658 865 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms