RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 LMNAP02545 664 aaKnown RBP5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 EDN1P05305 212 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 PRKCBP05771 671 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 THP07101 528 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 SP9P0CG40 484 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 GLULP15104 373 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 ALOX15P16050 662 aaPredicted RBP5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 AGXTP21549 392 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 MXRA7P84157 204 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 CREMQ03060 361 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 DPTQ07507 201 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 PRPF4BQ13523 1007 aaKnown RBP5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 TRIM29Q14134 588 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 ANKRD1Q15327 319 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 MAPK6Q16659 721 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 GLRA4Q5JXX5 417 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 LY6G5CQ5SRR4 150 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 Q6ZVL8 140 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 CATSPER3Q86XQ3 398 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 GPR65Q8IYL9 337 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 KIAA2013Q8IYS2 634 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 PQLC1Q8N2U9 271 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 NSUN7Q8NE18 718 aaKnown RBP5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 MCPH1Q8NEM0 835 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 PJA1Q8NG27 643 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 DEPTORQ8TB45 409 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 ITFG1Q8TB96 612 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 LNX1Q8TBB1 728 aaPredicted RBP5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 CASKIN2Q8WXE0 1202 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 ING5Q8WYH8 240 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 FGF13Q92913 245 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 GTF3C6Q969F1 213 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 KXD1Q9BQD3 176 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 ADPGKQ9BRR6 497 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 KIFC3Q9BVG8 833 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 FZD8Q9H461 694 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 MANSC1Q9H8J5 431 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 TUFT1Q9NNX1 390 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 DMRT3Q9NQL9 472 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 TMEM140Q9NV12 185 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 HCFC1R1Q9NWW0 138 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 TRPM5Q9NZQ8 1165 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 DLGAP2Q9P1A6 1054 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 CDH7Q9ULB5 785 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 DMDP11532 3685 aa5.65□□□□□ -1.51
RNU4-4P-201ENST00000364588 DMXL1Q9Y485 3027 aa5.65□□□□□ -1.51
RNU4-4P-201ENST00000364588 ZMYM2Q9UBW7 1377 aa5.65□□□□□ -1.51
RNU4-4P-201ENST00000364588 PATJQ8NI35 1801 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 CACNA1IQ9P0X4 2223 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 RIF1Q5UIP0 2472 aaKnown RBP5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 ARHGEF35A5YM69 484 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 TMEM191CA6NGB0 347 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 CXorf49A8MYA2 514 aaPredicted RBP5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 I3L4J1 428 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 B3GAT3O94766 335 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 ABHD16AO95870 558 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 C1RP00736 705 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 HNRNPA1P09651 372 aaKnown RBP eCLIP5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 XRCC6P12956 609 aaKnown RBP eCLIP5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 CYP11B2P19099 503 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 CD72P21854 359 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 TKTP29401 623 aaKnown RBP5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 OR1D2P34982 312 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 BRCC3P46736 316 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 CLCNKBP51801 687 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 STARD6P59095 220 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 NHLH2Q02577 135 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 PPP3CAQ08209 521 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 ST3GAL1Q11201 340 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 ELAVL2Q12926 359 aaKnown RBP5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 UBXN2BQ14CS0 331 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 NOMO1Q15155 1222 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 NAB2Q15742 525 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 MLF2Q15773 248 aaPredicted RBP5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 FAM187BQ17R55 369 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 TIGD2Q4W5G0 525 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 ATXN7L2Q5T6C5 722 aaPredicted RBP5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 ANKS6Q68DC2 871 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 RHOUQ7L0Q8 258 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 DCLK2Q8N568 766 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 PROKR1Q8TCW9 393 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 LARP4BQ92615 738 aaKnown RBP5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 RMDN1Q96DB5 314 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 CYFIP2Q96F07 1278 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 REXO4Q9GZR2 422 aaKnown RBP5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 C2orf40Q9H1Z8 148 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 DNMT3BQ9UBC3 853 aaKnown RBP5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 MTF2Q9Y483 593 aaPredicted RBP5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 CHST2Q9Y4C5 530 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 CDY1Q9Y6F8 540 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 ZFP37Q9Y6Q3 630 aaPredicted RBP5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 FRYLO94915 3013 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 CITO14578 2027 aa5.64□□□□□ -1.51
RNU4-4P-201ENST00000364588 KANSL1LA0AUZ9 987 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 MED19A0JLT2 244 aaPredicted RBP5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 ALG1L2C9J202 215 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 ACKR2O00590 384 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 OR52Z1P0C646 297 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 RAP2AP10114 183 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 RPA1P27694 616 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms