RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 C16orf70Q9BSU1 422 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 NT5C1AQ9BXI3 368 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 TMEM39AQ9NV64 488 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 SRRDQ9UH36 339 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 PADI3Q9ULW8 664 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 PCDHGC3Q9UN70 934 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 DOCK3Q8IZD9 2030 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 E9PBE3 544 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 TPP1O14773 563 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 KLHL41O60662 606 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 DUSP11O75319 330 aaKnown RBP9.27□□□□□ -0.93
TOP1-201ENST00000361337 IQCF3P0C7M6 154 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 IMPDH2P12268 514 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 CCDC130P13994 396 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 PDGFRAP16234 1089 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 TSHRP16473 764 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 GRIK1P39086 918 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 CHN2P52757 468 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 CSE1LP55060 971 aaKnown RBP9.27□□□□□ -0.93
TOP1-201ENST00000361337 GOLGA7BQ2TAP0 167 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 RWDD4Q6NW29 188 aaKnown RBP9.27□□□□□ -0.93
TOP1-201ENST00000361337 KDELC2Q7Z4H8 507 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 ZNF554Q86TJ5 538 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 ARMC7Q9H6L4 198 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 TRNAU1APQ9NX07 287 aaKnown RBP9.27□□□□□ -0.93
TOP1-201ENST00000361337 SBF1O95248 1867 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 C1orf232A0A0U1RR37 186 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 ZNF195O14628 629 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 AIM2O14862 343 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 SLC4A1P02730 911 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 ITGA2BP08514 1039 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 OR4Q2P0C623 313 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 PMLP29590 882 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 GHRHRQ02643 423 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 TAP1Q03518 808 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 PCLAFQ15004 111 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 NADK2Q4G0N4 442 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 ANKRD20A4Q4UJ75 823 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 PPM1LQ5SGD2 360 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 WSCD1Q658N2 575 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 TNS4Q8IZW8 715 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 PRICKLE1Q96MT3 831 aaPredicted RBP9.27□□□□□ -0.93
TOP1-201ENST00000361337 UNC93B1Q9H1C4 597 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 DSEQ9UL01 958 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 MFHAS1Q9Y4C4 1052 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 ACRP10323 421 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 TFE3P19532 575 aaPredicted RBP9.27□□□□□ -0.93
TOP1-201ENST00000361337 PGGT1BP53609 377 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 SLC10A2Q12908 348 aaPredicted RBP9.27□□□□□ -0.93
TOP1-201ENST00000361337 GEN1Q17RS7 908 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 MGAT5BQ3V5L5 792 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 PDPK2PQ6A1A2 396 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 AAGABQ6PD74 315 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 CES3Q6UWW8 571 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 ADGRG6Q86SQ4 1221 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 DDHD1Q8NEL9 900 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 PCDH19Q8TAB3 1148 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 MAPK15Q8TD08 544 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 ACTRT2Q8TDY3 377 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 DEPDC1BQ8WUY9 529 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 TMEM40Q8WWA1 233 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 CAPSLQ8WWF8 208 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 EDEM1Q92611 657 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 DPF3Q92784 378 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 NIFKQ9BYG3 293 aaKnown RBP9.27□□□□□ -0.93
TOP1-201ENST00000361337 CCDC90BQ9GZT6 254 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 MAF1Q9H063 256 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 DHX35Q9H5Z1 703 aaKnown RBP9.27□□□□□ -0.93
TOP1-201ENST00000361337 CNGB3Q9NQW8 809 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 APOBEC2Q9Y235 224 aaKnown RBP9.27□□□□□ -0.93
TOP1-201ENST00000361337 DTNAQ9Y4J8 743 aa9.27□□□□□ -0.93
TOP1-201ENST00000361337 SSC5DA1L4H1 1573 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 LINC00854A0A1B0GVQ3 168 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 WDR27A2RRH5 827 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 FAM159BA6NKW6 160 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 TBKBP1A7MCY6 615 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 NEMP1O14524 444 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 GAS2O43903 313 aaKnown RBP9.26□□□□□ -0.93
TOP1-201ENST00000361337 MSCO60682 206 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 KRT38O76015 456 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 SRGAP2BP0DMP2 458 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 SYN1P17600 705 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 CYP2C18P33260 490 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 ABCG1P45844 678 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 ATXN1P54253 815 aaKnown RBP9.26□□□□□ -0.93
TOP1-201ENST00000361337 MAP3K7CLP57077 242 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 ENPEPQ07075 957 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 OLIG2Q13516 323 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 DCAF6Q58WW2 860 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 KLHDC10Q6PID8 442 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 TMC5Q6UXY8 1006 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 ZPBP2Q6X784 338 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 LPCAT2Q7L5N7 544 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 IFNLR1Q8IU57 520 aaPredicted RBP9.26□□□□□ -0.93
TOP1-201ENST00000361337 ST13P5Q8NFI4 369 aaPredicted RBP9.26□□□□□ -0.93
TOP1-201ENST00000361337 DBF4BQ8NFT6 615 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 C17orf50Q8WW18 174 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 ATXN7L3BQ96GX2 97 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 RNF157Q96PX1 679 aa9.26□□□□□ -0.93
TOP1-201ENST00000361337 ZNF518BQ9C0D4 1074 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms