RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 NRP2O60462 931 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 CSE1LP55060 971 aaKnown RBP16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 CNTD1Q8N815 330 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 IL31RAQ8NI17 732 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 LGMNQ99538 433 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 TRIM62Q9BVG3 475 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 WDR12Q9GZL7 423 aaKnown RBP16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 ROGDIQ9GZN7 287 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 CATSPERBQ9H7T0 1116 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 PCDHB12Q9Y5F1 795 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 COL5A2P05997 1499 aaPredicted RBP16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 CCDC154A6NI56 674 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 UGT1A9O60656 530 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 FAM20BO75063 409 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 CYP2C9P11712 490 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 MAGEA8P43361 318 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 TNK2Q07912 1038 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 MSS51Q4VC12 460 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 SPANXN2Q5MJ10 180 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 FAM183BPQ6ZVS7 135 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 SLC41A1Q8IVJ1 513 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 ATG16L2Q8NAA4 619 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 UGT1A7Q9HAW7 530 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 UGT1A10Q9HAW8 530 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 UGT1A8Q9HAW9 530 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 HPS4Q9NQG7 708 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 PDZK1P1A8MUH7 402 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 GM2AP17900 193 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 XRCC1P18887 633 aaPredicted RBP16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 CHRNA5P30532 468 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 AKT1P31749 480 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 CCT8P50990 548 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 THOP1P52888 689 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 SLC18A2Q05940 514 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 CACNB2Q08289 660 aaPredicted RBP16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 LSM12Q3MHD2 195 aaKnown RBP16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 FRMD7Q6ZUT3 714 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 ZNF276Q8N554 614 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 SETD9Q8NE22 299 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 RDH11Q8TC12 318 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 GPC6Q9Y625 555 aaPredicted RBP16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 KCNU1A8MYU2 1149 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 ZSCAN9O15535 394 aaPredicted RBP16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 SERPINI2O75830 405 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 NADKO95544 446 aaPredicted RBP16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 HSMCR30P0CW71 290 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 IREB2P48200 963 aaKnown RBP16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 LAMTOR4Q0VGL1 99 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 PPIL2Q13356 520 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 ARL13AQ5H913 290 aaPredicted RBP16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 PLD5Q8N7P1 536 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 GATA6Q92908 595 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 OMA1Q96E52 524 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 UGT2B28Q9BY64 529 aa16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 AFF4Q9UHB7 1163 aaKnown RBP16.2■□□□□ 0.18
CLSTN1-201ENST00000361311 CD4P01730 458 aa16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 SPIRE1Q08AE8 756 aa16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 BST2Q10589 180 aaKnown RBP16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 EPS8Q12929 822 aa16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 BNIP2Q12982 314 aa16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 ERLEC1Q96DZ1 483 aa16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 PRR11Q96HE9 360 aaPredicted RBP16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 GATA5Q9BWX5 397 aaPredicted RBP16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 PCDH18Q9HCL0 1135 aa16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 FAM149AA5PLN7 773 aa16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 HBP1O60381 514 aa16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 POTEHQ6S545 545 aa16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 ANKRD23Q86SG2 305 aa16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 FAM126BQ8IXS8 530 aa16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 DQX1Q8TE96 717 aaKnown RBP16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 CELF6Q96J87 481 aaKnown RBP16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 IL22Q9GZX6 179 aa16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 ST6GALNAC4Q9H4F1 302 aa16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 PRDM12Q9H4Q4 367 aa16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 MYH7P12883 1935 aa16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 IGLV3-22A0A075B6J6 115 aa16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 ITM2AO43736 263 aa16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 EIF2S1P05198 315 aaKnown RBP16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 ARPP19P56211 112 aa16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 CGB2Q6NT52 195 aa16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 CPXM1Q96SM3 734 aa16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 OLA1Q9NTK5 396 aaKnown RBP16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 TRHDEQ9UKU6 1024 aa16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 FAM32AQ9Y421 112 aaKnown RBP16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 DUOX1Q9NRD9 1551 aa16.19■□□□□ 0.18
CLSTN1-201ENST00000361311 PNMA8CA0A1B0GUJ8 204 aa16.18■□□□□ 0.18
CLSTN1-201ENST00000361311 VWA5AO00534 786 aa16.18■□□□□ 0.18
CLSTN1-201ENST00000361311 IDH3BO43837 385 aa16.18■□□□□ 0.18
CLSTN1-201ENST00000361311 LYPLA2O95372 231 aa16.18■□□□□ 0.18
CLSTN1-201ENST00000361311 ZNF682O95780 498 aa16.18■□□□□ 0.18
CLSTN1-201ENST00000361311 CHRM3P20309 590 aa16.18■□□□□ 0.18
CLSTN1-201ENST00000361311 NRLP54845 237 aa16.18■□□□□ 0.18
CLSTN1-201ENST00000361311 ZNF410Q86VK4 478 aa16.18■□□□□ 0.18
CLSTN1-201ENST00000361311 ZDHHC17Q8IUH5 632 aa16.18■□□□□ 0.18
CLSTN1-201ENST00000361311 OR2T34Q8NGX1 318 aa16.18■□□□□ 0.18
CLSTN1-201ENST00000361311 OR2T3Q8NH03 318 aa16.18■□□□□ 0.18
CLSTN1-201ENST00000361311 FAM193BQ96PV7 902 aaPredicted RBP16.18■□□□□ 0.18
CLSTN1-201ENST00000361311 UBAP1Q9NZ09 502 aa16.18■□□□□ 0.18
CLSTN1-201ENST00000361311 PCDHGB4Q9UN71 923 aa16.18■□□□□ 0.18
CLSTN1-201ENST00000361311 EIF3LQ9Y262 564 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms