RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 ATP6V1B1P15313 513 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 FGFR3P22607 806 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 SLC5A2P31639 672 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 RPL9P32969 192 aaKnown RBP7.89□□□□□ -1.15
CCL28-201ENST00000361115 GJC1P36383 396 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 SLC1A1P43005 524 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 RPL5P46777 297 aaKnown RBP7.89□□□□□ -1.15
CCL28-201ENST00000361115 MTM1Q13496 603 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 DCTN2Q13561 401 aaKnown RBP7.89□□□□□ -1.15
CCL28-201ENST00000361115 CCNIQ14094 377 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 NFIL3Q16649 462 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 CES4AQ5XG92 561 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 LRRC8BQ6P9F7 803 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 NCCRP1Q6ZVX7 275 aaPredicted RBP7.89□□□□□ -1.15
CCL28-201ENST00000361115 PRPF39Q86UA1 669 aaKnown RBP7.89□□□□□ -1.15
CCL28-201ENST00000361115 TCEAL8Q8IYN2 117 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 ZSWIM2Q8NEG5 633 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 GCNAQ96QF7 691 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 FIZ1Q96SL8 496 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 PAFAH2Q99487 392 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 SIKE1Q9BRV8 207 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 SMYD3Q9H7B4 428 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 TAGLN3Q9UI15 199 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 NCOR1O75376 2440 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 TM9SF1O15321 606 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 EIF3DO15371 548 aaKnown RBP eCLIP7.89□□□□□ -1.15
CCL28-201ENST00000361115 DGAT1O75907 488 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 STBD1O95210 358 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 CLPTM1O96005 669 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 CD58P19256 250 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 CPOXP36551 454 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 ETV4P43268 484 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 QARSP47897 775 aaKnown RBP7.89□□□□□ -1.15
CCL28-201ENST00000361115 CD97P48960 835 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 TAS2R40P59535 323 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 PHEXP78562 749 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 SLC25A3Q00325 362 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 CSTF1Q05048 431 aaKnown RBP7.89□□□□□ -1.15
CCL28-201ENST00000361115 NSUN2Q08J23 767 aaKnown RBP eCLIP7.89□□□□□ -1.15
CCL28-201ENST00000361115 GPS1Q13098 491 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 GK3PQ14409 553 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 UBXN11Q5T124 520 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 LMBRD2Q68DH5 695 aaPredicted RBP7.89□□□□□ -1.15
CCL28-201ENST00000361115 FAAH2Q6GMR7 532 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 KYAT3Q6YP21 454 aaKnown RBP7.89□□□□□ -1.15
CCL28-201ENST00000361115 FAM71AQ8IYT1 594 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 SMYD1Q8NB12 490 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 HIPK4Q8NE63 616 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 MCPH1Q8NEM0 835 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 SLC26A7Q8TE54 656 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 FOXP3Q9BZS1 431 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 PCIF1Q9H4Z3 704 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 KLHL11Q9NVR0 708 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 DKK4Q9UBT3 224 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 DNPEPQ9ULA0 475 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 USP18Q9UMW8 372 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 TELO2Q9Y4R8 837 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 MUC6Q6W4X9 2439 aa7.89□□□□□ -1.15
CCL28-201ENST00000361115 ARHGAP42A6NI28 874 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 SLITRK3O94933 977 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 GLRA2P23416 452 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 SERPINB8P50452 374 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 ARSEP51690 589 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 ALDH18A1P54886 795 aaKnown RBP7.88□□□□□ -1.15
CCL28-201ENST00000361115 UBAP2LQ14157 1087 aaKnown RBP7.88□□□□□ -1.15
CCL28-201ENST00000361115 TRIP10Q15642 601 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 MSS51Q4VC12 460 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 RALGPS1Q5JS13 557 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 C1orf220Q5T0J3 134 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 AAGABQ6PD74 315 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 ADGRD1Q6QNK2 874 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 PPM1KQ8N3J5 372 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.88□□□□□ -1.15
CCL28-201ENST00000361115 PLEKHO2Q8TD55 490 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 DCAKDQ8WVC6 231 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 PRPF31Q8WWY3 499 aaKnown RBP7.88□□□□□ -1.15
CCL28-201ENST00000361115 PPP1R14BQ96C90 147 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 SERAC1Q96JX3 654 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 WDR83Q9BRX9 315 aaKnown RBP7.88□□□□□ -1.15
CCL28-201ENST00000361115 CCDC106Q9BWC9 280 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 VN1R3Q9BXE9 311 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 PAIP2BQ9ULR5 123 aaKnown RBP7.88□□□□□ -1.15
CCL28-201ENST00000361115 WDR37Q9Y2I8 494 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 PDE5AO76074 875 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 ASGR2P07307 311 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 KRT10P13645 584 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 GAP43P17677 238 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 EFNA5P52803 228 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 DNAL1Q4LDG9 190 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 PPM1JQ5JR12 505 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 EFHC1Q5JVL4 640 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 ACAD10Q6JQN1 1059 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 CHSY1Q86X52 802 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 ERMNQ8TAM6 284 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 FNDC8Q8TC99 324 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 ACDQ96AP0 544 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 MECRQ9BV79 373 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 TIMMDC1Q9NPL8 285 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 PFDN4Q9NQP4 134 aa7.88□□□□□ -1.15
CCL28-201ENST00000361115 MARCOQ9UEW3 520 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms