RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 DCTN2Q13561 401 aaKnown RBP9.81□□□□□ -0.84
CUX1-203ENST00000360264 ATG4AQ8WYN0 398 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 ZCCHC17Q9NP64 241 aaKnown RBP9.81□□□□□ -0.84
CUX1-203ENST00000360264 COMMD9Q9P000 198 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 MRPS23Q9Y3D9 190 aaKnown RBP9.81□□□□□ -0.84
CUX1-203ENST00000360264 CNTNAP2Q9UHC6 1331 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 VEGFAP15692 232 aaPredicted RBP9.81□□□□□ -0.84
CUX1-203ENST00000360264 EPORP19235 508 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 TYMPP19971 482 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 TTC23Q5W5X9 447 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 ACTL9Q8TC94 416 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 ZDHHC4Q9NPG8 344 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 VPS4AQ9UN37 437 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 NRCAMQ92823 1304 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 ATP9AO75110 1047 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 PARP6Q2NL67 630 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.81□□□□□ -0.84
CUX1-203ENST00000360264 CROCCP3Q8IVE0 287 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 ARHGEF19Q8IW93 802 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 C8orf59Q8N0T1 100 aaPredicted RBP9.81□□□□□ -0.84
CUX1-203ENST00000360264 SH2D3CQ8N5H7 860 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.81□□□□□ -0.84
CUX1-203ENST00000360264 CERKQ8TCT0 537 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 SPPL2AQ8TCT8 520 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 CPB2Q96IY4 423 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 FAM118BQ9BPY3 351 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 SLC27A6Q9Y2P4 619 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 ZBTB12Q9Y330 459 aaPredicted RBP9.81□□□□□ -0.84
CUX1-203ENST00000360264 BGNP21810 368 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 ST3GAL1Q11201 340 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 ABCC13Q9NSE7 274 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 CRATP43155 626 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 CDK16Q00536 496 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 PTSQ03393 145 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 CASKIN2Q8WXE0 1202 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 KAT2BQ92831 832 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 NARS2Q96I59 477 aaKnown RBP9.81□□□□□ -0.84
CUX1-203ENST00000360264 APOPT1Q96IL0 206 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 TMEM79Q9BSE2 394 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 ATP13A3Q9H7F0 1226 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 CKLFQ9UBR5 152 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 USP32Q8NFA0 1604 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 NFASCO94856 1347 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 GSAPA4D1B5 854 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 GCNT1Q02742 428 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 TRIM32Q13049 653 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 COLGALT2Q8IYK4 626 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 AMER2Q8N7J2 671 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 SMYD1Q8NB12 490 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 HEXDCQ8WVB3 486 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 MRPL57Q9BQC6 102 aaKnown RBP9.81□□□□□ -0.84
CUX1-203ENST00000360264 HGH1Q9BTY7 390 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 ZDHHC9Q9Y397 364 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 PLEKP08567 350 aaPredicted RBP9.81□□□□□ -0.84
CUX1-203ENST00000360264 CXCL8P10145 99 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 WDR93Q6P2C0 686 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 TMBIM4Q9HC24 238 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 DDX43Q9NXZ2 648 aaKnown RBP9.81□□□□□ -0.84
CUX1-203ENST00000360264 CACNA1DQ01668 2161 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 ASTN2O75129 1339 aaPredicted RBP9.81□□□□□ -0.84
CUX1-203ENST00000360264 APOC4-APOC2K7ER74 178 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 APOC2P02655 101 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 PDX1P52945 283 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 CORO7P57737 925 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 SV2AQ7L0J3 742 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 MDM1Q8TC05 714 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 CELF4Q9BZC1 486 aaKnown RBP9.81□□□□□ -0.84
CUX1-203ENST00000360264 C3orf18Q9UK00 162 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 MAGI3Q5TCQ9 1506 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 FOXN3O00409 490 aaPredicted RBP9.81□□□□□ -0.84
CUX1-203ENST00000360264 CLK2P49760 499 aaKnown RBP9.81□□□□□ -0.84
CUX1-203ENST00000360264 RPL14P50914 215 aaKnown RBP9.81□□□□□ -0.84
CUX1-203ENST00000360264 BCAP31P51572 246 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 NUAK2Q9H093 628 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 C8orf4Q9NR00 106 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 EVPLQ92817 2033 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 WDR27A2RRH5 827 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 ERBB2P04626 1255 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 PCSK2P16519 638 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 BCL2L1Q07817 233 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 USP41Q3LFD5 358 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 NOL9Q5SY16 702 aaKnown RBP9.81□□□□□ -0.84
CUX1-203ENST00000360264 MZT2BQ6NZ67 158 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 MCOLN2Q8IZK6 566 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 LGI2Q8N0V4 545 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 KLF6Q99612 283 aaPredicted RBP9.81□□□□□ -0.84
CUX1-203ENST00000360264 PDCD10Q9BUL8 212 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 TTLL2Q9BWV7 592 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 DNMT3LQ9UJW3 386 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 AFDNP55196 1824 aaKnown RBP9.81□□□□□ -0.84
CUX1-203ENST00000360264 H3BQF6 201 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 INPP4BO15327 924 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 SEC22BO75396 215 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 NTSR2O95665 410 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 FTH1P02794 183 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 STOX1Q6ZVD7 989 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 OSMRQ99650 979 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 KIAA1683Q9H0B3 1180 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 LMAN2LQ9H0V9 348 aa9.81□□□□□ -0.84
CUX1-203ENST00000360264 LRCH1Q9Y2L9 728 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms