RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 MT-CO1P00395 513 aa19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 ZFXP17010 805 aaPredicted RBP19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 GABRG2P18507 467 aa19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 SERPINH1P50454 418 aaKnown RBP19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 ARSEP51690 589 aa19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 ARF5P84085 180 aa19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 DMWDQ09019 674 aa19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 BYSLQ13895 437 aaKnown RBP19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 USP39Q53GS9 565 aaKnown RBP19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 C22orf39Q6P5X5 142 aa19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 Q6ZVU0 165 aa19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 CEP68Q76N32 757 aa19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 METTL3Q86U44 580 aaKnown RBP19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 WDR5BQ86VZ2 330 aa19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 TMPRSS6Q8IU80 811 aa19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 KATNAL2Q8IYT4 538 aa19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 RCOR2Q8IZ40 523 aa19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 NETO2Q8NC67 525 aa19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 FAM71BQ8TC56 605 aa19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 OR8D1Q8WZ84 308 aa19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 SIPA1Q96FS4 1042 aa19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 SPACA7Q96KW9 195 aa19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 NOL6Q9H6R4 1146 aaKnown RBP19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 LRRC19Q9H756 370 aa19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 PRSS16Q9NQE7 514 aa19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 ETNK2Q9NVF9 386 aa19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 EBF1Q9UH73 591 aa19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 MFHAS1Q9Y4C4 1052 aa19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 PCDHGA2Q9Y5H1 932 aa19.56■□□□□ 0.72
HLA-DRB1-201ENST00000360004 ZNF318Q5VUA4 2279 aa19.55■□□□□ 0.72
HLA-DRB1-201ENST00000360004 K7ERQ8 282 aa19.55■□□□□ 0.72
HLA-DRB1-201ENST00000360004 NEBLO76041 1014 aa19.55■□□□□ 0.72
HLA-DRB1-201ENST00000360004 DNTTP04053 509 aa19.55■□□□□ 0.72
HLA-DRB1-201ENST00000360004 NDUFV2P19404 249 aa19.55■□□□□ 0.72
HLA-DRB1-201ENST00000360004 HOXA6P31267 233 aa19.55■□□□□ 0.72
HLA-DRB1-201ENST00000360004 CTNNA1P35221 906 aaKnown RBP19.55■□□□□ 0.72
HLA-DRB1-201ENST00000360004 RWDD2BP57060 319 aa19.55■□□□□ 0.72
HLA-DRB1-201ENST00000360004 DYNLT1P63172 113 aa19.55■□□□□ 0.72
HLA-DRB1-201ENST00000360004 TCF15Q12870 199 aa19.55■□□□□ 0.72
HLA-DRB1-201ENST00000360004 CAMK2GQ13555 558 aaPredicted RBP19.55■□□□□ 0.72
HLA-DRB1-201ENST00000360004 TFDP2Q14188 446 aa19.55■□□□□ 0.72
HLA-DRB1-201ENST00000360004 CCDC181Q5TID7 509 aa19.55■□□□□ 0.72
HLA-DRB1-201ENST00000360004 KAZNQ674X7 775 aa19.55■□□□□ 0.72
HLA-DRB1-201ENST00000360004 ZNF776Q68DI1 518 aaPredicted RBP19.55■□□□□ 0.72
HLA-DRB1-201ENST00000360004 NPWQ8N729 165 aa19.55■□□□□ 0.72
HLA-DRB1-201ENST00000360004 PCDH19Q8TAB3 1148 aa19.55■□□□□ 0.72
HLA-DRB1-201ENST00000360004 MYO19Q96H55 970 aa19.55■□□□□ 0.72
HLA-DRB1-201ENST00000360004 RNF157Q96PX1 679 aa19.55■□□□□ 0.72
HLA-DRB1-201ENST00000360004 TNKS2Q9H2K2 1166 aa19.55■□□□□ 0.72
HLA-DRB1-201ENST00000360004 FCF1Q9Y324 198 aaKnown RBP19.55■□□□□ 0.72
HLA-DRB1-201ENST00000360004 CAPN6Q9Y6Q1 641 aa19.55■□□□□ 0.72
HLA-DRB1-201ENST00000360004 CCDC163A0A0D9SF12 145 aa19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 MIF4GDA9UHW6 222 aaKnown RBP19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 MAP3K13O43283 966 aa19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 ZMPSTE24O75844 475 aa19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 VAV1P15498 845 aa19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 IL4RP24394 825 aa19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 MARCKSL1P49006 195 aa19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 VASPP50552 380 aaPredicted RBP19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 SFSWAPQ12872 951 aaKnown RBP19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 ELAVL3Q14576 367 aaKnown RBP19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 TTC31Q49AM3 519 aaPredicted RBP19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 MFSD7Q6UXD7 560 aa19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 SPOCD1Q6ZMY3 1216 aa19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 RASSF3Q86WH2 238 aa19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 VSIG1Q86XK7 387 aa19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 STK40Q8N2I9 435 aa19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 PCDH20Q8N6Y1 951 aaKnown RBP19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 LRRC57Q8N9N7 239 aa19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 EXD1Q8NHP7 514 aa19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 CASKIN2Q8WXE0 1202 aa19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 KRT35Q92764 455 aa19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 CEP44Q9C0F1 390 aa19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 SLC6A17Q9H1V8 727 aa19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 FAM86C1Q9NVL1 165 aa19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 IPO11Q9UI26 975 aaKnown RBP19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 PCDHA3Q9Y5H8 950 aa19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 HEY1Q9Y5J3 304 aa19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 R4GN57 208 aa19.54■□□□□ 0.72
HLA-DRB1-201ENST00000360004 ZNF487B1APH4 448 aa19.53■□□□□ 0.72
HLA-DRB1-201ENST00000360004 SMAD6O43541 496 aaKnown RBP19.53■□□□□ 0.72
HLA-DRB1-201ENST00000360004 MFSD11O43934 449 aa19.53■□□□□ 0.72
HLA-DRB1-201ENST00000360004 PRAMEF11O60813 436 aa19.53■□□□□ 0.72
HLA-DRB1-201ENST00000360004 ZNF217O75362 1048 aa19.53■□□□□ 0.72
HLA-DRB1-201ENST00000360004 RPP40O75818 363 aaKnown RBP19.53■□□□□ 0.72
HLA-DRB1-201ENST00000360004 IL1BP01584 269 aa19.53■□□□□ 0.72
HLA-DRB1-201ENST00000360004 TDGF1P13385 188 aa19.53■□□□□ 0.72
HLA-DRB1-201ENST00000360004 MX2P20592 715 aa19.53■□□□□ 0.72
HLA-DRB1-201ENST00000360004 CTNNA2P26232 953 aa19.53■□□□□ 0.72
HLA-DRB1-201ENST00000360004 PSMD8P48556 350 aa19.53■□□□□ 0.72
HLA-DRB1-201ENST00000360004 RHOAP61586 193 aa19.53■□□□□ 0.72
HLA-DRB1-201ENST00000360004 LLGL1Q15334 1064 aa19.53■□□□□ 0.72
HLA-DRB1-201ENST00000360004 C9orf64Q5T6V5 341 aa19.53■□□□□ 0.72
HLA-DRB1-201ENST00000360004 NCBP2-AS2Q69YL0 99 aa19.53■□□□□ 0.72
HLA-DRB1-201ENST00000360004 PRR23BQ6ZRT6 265 aa19.53■□□□□ 0.72
HLA-DRB1-201ENST00000360004 NT5DC3Q86UY8 548 aa19.53■□□□□ 0.72
HLA-DRB1-201ENST00000360004 MMAAQ8IVH4 418 aaKnown RBP19.53■□□□□ 0.72
HLA-DRB1-201ENST00000360004 ARHGAP12Q8IWW6 846 aa19.53■□□□□ 0.72
HLA-DRB1-201ENST00000360004 BBS5Q8N3I7 341 aa19.53■□□□□ 0.72
HLA-DRB1-201ENST00000360004 FAF2Q96CS3 445 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms