RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 P2RY11Q96G91 374 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 SPATA17Q96L03 361 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 PITPNM3Q9BZ71 974 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 MYLK2Q9H1R3 596 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 PRDM12Q9H4Q4 367 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 ZNF576Q9H609 170 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 NMUR1Q9HB89 426 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 TMEM165Q9HC07 324 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 MAN1C1Q9NR34 630 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 EIF2B3Q9NR50 452 aaKnown RBP14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 ARHGEF3Q9NR81 526 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 PAPOLBQ9NRJ5 636 aaKnown RBP14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 ARHGEF38Q9NXL2 777 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 GMIPQ9P107 970 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 OR12D3Q9UGF7 316 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 DOCK6Q96HP0 2047 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 RFPL2O75678 378 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 MLNP12872 115 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 ALADP13716 330 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 YWHAQP27348 245 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 SERPINB6P35237 376 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 AP1B1Q10567 949 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 FAXCQ5TGI0 409 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 SCD5Q86SK9 330 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 IGDCC3Q8IVU1 814 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 C4orf33Q8N1A6 199 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 LRRN4Q8WUT4 740 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 FBXO32Q969P5 355 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 HAPLN3Q96S86 360 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 SMOC2Q9H3U7 446 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 SLCO1B3Q9NPD5 702 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 OSER1Q9NX31 292 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 PCDHGA4Q9Y5G9 962 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 HCFC2Q9Y5Z7 792 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 A0A1W2PQH9 124 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 TRDMT1O14717 391 aaKnown RBP14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 IRAK2O43187 625 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 MTSS1O43312 755 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 NEFHP12036 1026 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 MX2P20592 715 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 TARSP26639 723 aaKnown RBP14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 NRIP1P48552 1158 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 PLD1Q13393 1074 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 PARP6Q2NL67 630 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 ZNF697Q5TEC3 545 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 ASRGL1Q7L266 308 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 CCNYQ8ND76 341 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 RNF34Q969K3 372 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 MAGEB18Q96M61 343 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 FAM167BQ9BTA0 163 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 FBXO44Q9H4M3 255 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 PIDD1Q9HB75 910 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 SSU72Q9NP77 194 aaKnown RBP14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 HSFX1Q9UBD0 423 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 SCML2Q9UQR0 700 aa14.15□□□□□ -0.14
CSNK1E-201ENST00000359867 PRRC2BQ5JSZ5 2229 aaKnown RBP14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 RNF103O00237 685 aa14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 PRPF4O43172 522 aaKnown RBP eCLIP14.14□□□□□ -0.153e-16■■■□□ 15.7
CSNK1E-201ENST00000359867 PIAS1O75925 651 aa14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 HMGA1P17096 107 aaKnown RBP14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 KRT15P19012 456 aa14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 ABL2P42684 1182 aa14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 MON1AQ86VX9 555 aa14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 MFN1Q8IWA4 741 aa14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 ARHGAP18Q8N392 663 aa14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 UTP4Q969X6 686 aaKnown RBP14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 ERP27Q96DN0 273 aa14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 PAFAH2Q99487 392 aa14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 TLE6Q9H808 572 aa14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 IGSF9Q9P2J2 1179 aa14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 SMG5Q9UPR3 1016 aaKnown RBP14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 CCL16O15467 120 aa14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 AVILO75366 819 aa14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 PPIDQ08752 370 aaKnown RBP14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 VEPH1Q14D04 833 aa14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 TAF12Q16514 161 aa14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 ZNF449Q6P9G9 518 aa14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 CCDC33Q8N5R6 958 aa14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 GBP7Q8N8V2 638 aaPredicted RBP14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 HDAC11Q96DB2 347 aa14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 TRABDQ9H4I3 376 aa14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 IL37Q9NZH6 218 aa14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 NKX1-2Q9UD57 310 aaPredicted RBP14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 HAO1Q9UJM8 370 aa14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 MTCL1Q9Y4B5 1905 aaKnown RBP14.14□□□□□ -0.15
CSNK1E-201ENST00000359867 TCRBV9S1A1TA0A576 114 aa14.13□□□□□ -0.15
CSNK1E-201ENST00000359867 FAM47DPA6NHR8 397 aa14.13□□□□□ -0.15
CSNK1E-201ENST00000359867 LRIG2O94898 1065 aa14.13□□□□□ -0.15
CSNK1E-201ENST00000359867 LRG1P02750 347 aa14.13□□□□□ -0.15
CSNK1E-201ENST00000359867 CCND1P24385 295 aa14.13□□□□□ -0.15
CSNK1E-201ENST00000359867 CCR1P32246 355 aa14.13□□□□□ -0.15
CSNK1E-201ENST00000359867 EPHB3P54753 998 aa14.13□□□□□ -0.15
CSNK1E-201ENST00000359867 WASHC5Q12768 1159 aa14.13□□□□□ -0.15
CSNK1E-201ENST00000359867 PPP2R5DQ14738 602 aa14.13□□□□□ -0.15
CSNK1E-201ENST00000359867 LRIT3Q3SXY7 679 aa14.13□□□□□ -0.15
CSNK1E-201ENST00000359867 SYCP2LQ5T4T6 812 aa14.13□□□□□ -0.15
CSNK1E-201ENST00000359867 PDE12Q6L8Q7 609 aaKnown RBP14.13□□□□□ -0.15
CSNK1E-201ENST00000359867 ZNF534Q76KX8 674 aa14.13□□□□□ -0.15
CSNK1E-201ENST00000359867 DNAJB7Q7Z6W7 309 aaPredicted RBP14.13□□□□□ -0.15
CSNK1E-201ENST00000359867 AGGF1Q8N302 714 aaeCLIP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms