RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 DBN1Q16643 649 aa18.99■□□□□ 0.63
SNX11-201ENST00000359238 DDR2Q16832 855 aa18.99■□□□□ 0.63
SNX11-201ENST00000359238 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.99■□□□□ 0.63
SNX11-201ENST00000359238 DNAL1Q4LDG9 190 aa18.99■□□□□ 0.63
SNX11-201ENST00000359238 RAPH1Q70E73 1250 aa18.99■□□□□ 0.63
SNX11-201ENST00000359238 PIP4K2CQ8TBX8 421 aa18.99■□□□□ 0.63
SNX11-201ENST00000359238 DHRS4Q9BTZ2 278 aa18.99■□□□□ 0.63
SNX11-201ENST00000359238 CRISPLD1Q9H336 500 aa18.99■□□□□ 0.63
SNX11-201ENST00000359238 NMUR1Q9HB89 426 aa18.99■□□□□ 0.63
SNX11-201ENST00000359238 ARMCX1Q9P291 453 aa18.99■□□□□ 0.63
SNX11-201ENST00000359238 RABGEF1Q9UJ41 708 aa18.99■□□□□ 0.63
SNX11-201ENST00000359238 CHD7Q9P2D1 2997 aa18.98■□□□□ 0.63
SNX11-201ENST00000359238 ARHGEF37A1IGU5 675 aa18.98■□□□□ 0.63
SNX11-201ENST00000359238 PARNO95453 639 aaKnown RBP18.98■□□□□ 0.63
SNX11-201ENST00000359238 ALDH2P05091 517 aa18.98■□□□□ 0.63
SNX11-201ENST00000359238 DHRS4L1P0CG22 281 aa18.98■□□□□ 0.63
SNX11-201ENST00000359238 UQCRBP14927 111 aa18.98■□□□□ 0.63
SNX11-201ENST00000359238 CPA2P48052 419 aa18.98■□□□□ 0.63
SNX11-201ENST00000359238 BASP1P80723 227 aaKnown RBP18.98■□□□□ 0.63
SNX11-201ENST00000359238 IKBKEQ14164 716 aa18.98■□□□□ 0.63
SNX11-201ENST00000359238 VARS2Q5ST30 1063 aaKnown RBP18.98■□□□□ 0.63
SNX11-201ENST00000359238 PM20D1Q6GTS8 502 aa18.98■□□□□ 0.63
SNX11-201ENST00000359238 FAM117BQ6P1L5 589 aa18.98■□□□□ 0.63
SNX11-201ENST00000359238 KYAT3Q6YP21 454 aaKnown RBP18.98■□□□□ 0.63
SNX11-201ENST00000359238 TAC4Q86UU9 113 aa18.98■□□□□ 0.63
SNX11-201ENST00000359238 ATAD1Q8NBU5 361 aa18.98■□□□□ 0.63
SNX11-201ENST00000359238 LGMNQ99538 433 aa18.98■□□□□ 0.63
SNX11-201ENST00000359238 CEP41Q9BYV8 373 aa18.98■□□□□ 0.63
SNX11-201ENST00000359238 DDIT4Q9NX09 232 aa18.98■□□□□ 0.63
SNX11-201ENST00000359238 OSER1Q9NX31 292 aa18.98■□□□□ 0.63
SNX11-201ENST00000359238 SLC7A8Q9UHI5 535 aa18.98■□□□□ 0.63
SNX11-201ENST00000359238 TRIM43BA6NCK2 446 aa18.97■□□□□ 0.63
SNX11-201ENST00000359238 HOXA2O43364 376 aa18.97■□□□□ 0.63
SNX11-201ENST00000359238 AVILO75366 819 aa18.97■□□□□ 0.63
SNX11-201ENST00000359238 USP1O94782 785 aa18.97■□□□□ 0.63
SNX11-201ENST00000359238 HSPA1AP0DMV8 641 aaKnown RBP18.97■□□□□ 0.63
SNX11-201ENST00000359238 HSPA1BP0DMV9 641 aaKnown RBP18.97■□□□□ 0.63
SNX11-201ENST00000359238 CSF2RAP15509 400 aa18.97■□□□□ 0.63
SNX11-201ENST00000359238 GRIK1P39086 918 aa18.97■□□□□ 0.63
SNX11-201ENST00000359238 GPX6P59796 221 aa18.97■□□□□ 0.63
SNX11-201ENST00000359238 HPCAP84074 193 aa18.97■□□□□ 0.63
SNX11-201ENST00000359238 KCNT2Q6UVM3 1135 aa18.97■□□□□ 0.63
SNX11-201ENST00000359238 SATL1Q86VE3 508 aa18.97■□□□□ 0.63
SNX11-201ENST00000359238 SCN4BQ8IWT1 228 aa18.97■□□□□ 0.63
SNX11-201ENST00000359238 RNF139Q8WU17 664 aa18.97■□□□□ 0.63
SNX11-201ENST00000359238 TRIM43Q96BQ3 446 aaPredicted RBP18.97■□□□□ 0.63
SNX11-201ENST00000359238 PPP1R14BQ96C90 147 aa18.97■□□□□ 0.63
SNX11-201ENST00000359238 SHROOM3Q8TF72 1996 aa18.97■□□□□ 0.63
SNX11-201ENST00000359238 NDC80O14777 642 aa18.97■□□□□ 0.63
SNX11-201ENST00000359238 TGM2P21980 687 aa18.97■□□□□ 0.63
SNX11-201ENST00000359238 C1orf146Q5VVC0 180 aa18.97■□□□□ 0.63
SNX11-201ENST00000359238 KLC3Q6P597 504 aa18.97■□□□□ 0.63
SNX11-201ENST00000359238 CNKSR3Q6P9H4 555 aa18.97■□□□□ 0.63
SNX11-201ENST00000359238 SPATA2LQ8IUW3 424 aaPredicted RBP18.97■□□□□ 0.63
SNX11-201ENST00000359238 IGDCC3Q8IVU1 814 aa18.97■□□□□ 0.63
SNX11-201ENST00000359238 NMD3Q96D46 503 aaKnown RBP18.97■□□□□ 0.63
SNX11-201ENST00000359238 MTBPQ96DY7 904 aa18.97■□□□□ 0.63
SNX11-201ENST00000359238 CYTH2Q99418 400 aa18.97■□□□□ 0.63
SNX11-201ENST00000359238 STAP1Q9ULZ2 295 aa18.97■□□□□ 0.63
SNX11-201ENST00000359238 RANBP2P49792 3224 aaKnown RBP18.97■□□□□ 0.63
SNX11-201ENST00000359238 SPECC1L-ADORA2AF8WAN1 911 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 MSI1O43347 362 aaKnown RBP18.96■□□□□ 0.63
SNX11-201ENST00000359238 AP1G1O43747 822 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 FBXO21O94952 628 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 OAZ2O95190 189 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 GALTP07902 379 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 PHBP35232 272 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 ADRA1BP35368 520 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 ARPP19P56211 112 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 RTP2Q5QGT7 225 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 SCD5Q86SK9 330 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 FBXO27Q8NI29 283 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 THTPAQ9BU02 230 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 MRPL9Q9BYD2 267 aaKnown RBP18.96■□□□□ 0.63
SNX11-201ENST00000359238 C12orf65Q9H3J6 166 aaKnown RBP18.96■□□□□ 0.63
SNX11-201ENST00000359238 ALG13Q9NP73 1137 aaKnown RBP18.96■□□□□ 0.63
SNX11-201ENST00000359238 KCNK4Q9NYG8 393 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 SFMBT1Q9UHJ3 866 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 TAGLN3Q9UI15 199 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 SHOC2Q9UQ13 582 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 C2orf71A6NGG8 1288 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 VNN2O95498 520 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 METTL18O95568 372 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 ENO1P06733 434 aaKnown RBP18.96■□□□□ 0.63
SNX11-201ENST00000359238 FUT10Q6P4F1 479 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 DHDDSQ86SQ9 333 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 ALYREFQ86V81 257 aaKnown RBP18.96■□□□□ 0.63
SNX11-201ENST00000359238 TREML1Q86YW5 311 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 LRRC43Q8N309 656 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 CATSPER2Q96P56 530 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 COLEC11Q9BWP8 271 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 S100A14Q9HCY8 104 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 CLIC5Q9NZA1 410 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 SSX2IPQ9Y2D8 614 aa18.96■□□□□ 0.63
SNX11-201ENST00000359238 CLUHO75153 1309 aa18.95■□□□□ 0.62
SNX11-201ENST00000359238 ETV4P43268 484 aa18.95■□□□□ 0.62
SNX11-201ENST00000359238 MAPRE1Q15691 268 aaKnown RBP18.95■□□□□ 0.62
SNX11-201ENST00000359238 KLHL38Q2WGJ6 581 aa18.95■□□□□ 0.62
SNX11-201ENST00000359238 DQX1Q8TE96 717 aaKnown RBP18.95■□□□□ 0.62
SNX11-201ENST00000359238 CLPTM1LQ96KA5 538 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms