RNA–Protein interactions for RNA: ENST00000358779.9

CDK11A-204, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK11A, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-204ENST00000358779 EPAS1Q99814 870 aa18.1■□□□□ 0.49
CDK11A-204ENST00000358779 KLHL4Q9C0H6 718 aa18.1■□□□□ 0.49
CDK11A-204ENST00000358779 CACNG4Q9UBN1 327 aa18.1■□□□□ 0.49
CDK11A-204ENST00000358779 SSX2IPQ9Y2D8 614 aa18.1■□□□□ 0.49
CDK11A-204ENST00000358779 FNDC1Q4ZHG4 1894 aaPredicted RBP18.1■□□□□ 0.49
CDK11A-204ENST00000358779 EME2A4GXA9 379 aaPredicted RBP18.1■□□□□ 0.49
CDK11A-204ENST00000358779 TREHO43280 583 aa18.1■□□□□ 0.49
CDK11A-204ENST00000358779 FAM163BP0C2L3 166 aa18.1■□□□□ 0.49
CDK11A-204ENST00000358779 RAG1P15918 1043 aa18.1■□□□□ 0.49
CDK11A-204ENST00000358779 PEX2P28328 305 aa18.1■□□□□ 0.49
CDK11A-204ENST00000358779 HADHAP40939 763 aa18.1■□□□□ 0.49
CDK11A-204ENST00000358779 CSRP3P50461 194 aa18.1■□□□□ 0.49
CDK11A-204ENST00000358779 CDH17Q12864 832 aa18.1■□□□□ 0.49
CDK11A-204ENST00000358779 LIPMQ5VYY2 423 aa18.1■□□□□ 0.49
CDK11A-204ENST00000358779 NAPEPLDQ6IQ20 393 aa18.1■□□□□ 0.49
CDK11A-204ENST00000358779 SLC30A9Q6PML9 568 aa18.1■□□□□ 0.49
CDK11A-204ENST00000358779 ZYG11AQ6WRX3 759 aa18.1■□□□□ 0.49
CDK11A-204ENST00000358779 RDH11Q8TC12 318 aa18.1■□□□□ 0.49
CDK11A-204ENST00000358779 TEKT5Q96M29 485 aa18.1■□□□□ 0.49
CDK11A-204ENST00000358779 GBP5Q96PP8 586 aa18.1■□□□□ 0.49
CDK11A-204ENST00000358779 LENG8Q96PV6 779 aaPredicted RBP18.1■□□□□ 0.49
CDK11A-204ENST00000358779 COLEC11Q9BWP8 271 aa18.1■□□□□ 0.49
CDK11A-204ENST00000358779 C1QTNF1Q9BXJ1 281 aa18.1■□□□□ 0.49
CDK11A-204ENST00000358779 TMEM30AQ9NV96 361 aa18.1■□□□□ 0.49
CDK11A-204ENST00000358779 RAP2CQ9Y3L5 183 aa18.1■□□□□ 0.49
CDK11A-204ENST00000358779 CCDC78A2IDD5 438 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 MATN2O00339 956 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 RNASEH1O60930 286 aaKnown RBP18.09■□□□□ 0.49
CDK11A-204ENST00000358779 YBX3P16989 372 aaKnown RBP eCLIP18.09■□□□□ 0.49
CDK11A-204ENST00000358779 PIK3R1P27986 724 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 SERPINB5P36952 375 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 MSLNQ13421 630 aaPredicted RBP18.09■□□□□ 0.49
CDK11A-204ENST00000358779 RAB41Q5JT25 222 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 TWF2Q6IBS0 349 aaKnown RBP18.09■□□□□ 0.49
CDK11A-204ENST00000358779 ZC3HC1Q86WB0 502 aaKnown RBP18.09■□□□□ 0.49
CDK11A-204ENST00000358779 PCED1BQ96HM7 432 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 SENP8Q96LD8 212 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 TSNARE1Q96NA8 513 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 FAM192AQ9GZU8 254 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 DRC3Q9H069 523 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 NSMCE4AQ9NXX6 385 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 TLK1Q9UKI8 766 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 SLC45A1Q9Y2W3 748 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 NEMP1O14524 444 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 JCHAINP01591 159 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 XIAPP98170 497 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 ITGA7Q13683 1181 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 PRPSAP1Q14558 356 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 USP50Q70EL3 339 aaPredicted RBP18.09■□□□□ 0.49
CDK11A-204ENST00000358779 EDEM1Q92611 657 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 MOCOSQ96EN8 888 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 TKTL2Q9H0I9 626 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 RHOJQ9H4E5 214 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 WDR55Q9H6Y2 383 aaPredicted RBP18.09■□□□□ 0.49
CDK11A-204ENST00000358779 ACSS2Q9NR19 701 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 PAPOLBQ9NRJ5 636 aaKnown RBP18.09■□□□□ 0.49
CDK11A-204ENST00000358779 RRN3Q9NYV6 651 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 OR12D3Q9UGF7 316 aa18.09■□□□□ 0.49
CDK11A-204ENST00000358779 CCL15-CCL14A0A0B4J2E2 113 aa18.08■□□□□ 0.49
CDK11A-204ENST00000358779 HDAC3O15379 428 aa18.08■□□□□ 0.49
CDK11A-204ENST00000358779 PHGDHO43175 533 aaKnown RBP18.08■□□□□ 0.49
CDK11A-204ENST00000358779 LRIG2O94898 1065 aa18.08■□□□□ 0.49
CDK11A-204ENST00000358779 SBK3P0C264 359 aa18.08■□□□□ 0.49
CDK11A-204ENST00000358779 SAT1P21673 171 aa18.08■□□□□ 0.49
CDK11A-204ENST00000358779 CCR10P46092 362 aa18.08■□□□□ 0.49
CDK11A-204ENST00000358779 GRIA4P48058 902 aa18.08■□□□□ 0.49
CDK11A-204ENST00000358779 PSEN2P49810 448 aa18.08■□□□□ 0.49
CDK11A-204ENST00000358779 AQP4P55087 323 aa18.08■□□□□ 0.49
CDK11A-204ENST00000358779 PPP2R5DQ14738 602 aa18.08■□□□□ 0.49
CDK11A-204ENST00000358779 CCL15Q16663 113 aa18.08■□□□□ 0.49
CDK11A-204ENST00000358779 SEL1L3Q68CR1 1132 aa18.08■□□□□ 0.49
CDK11A-204ENST00000358779 ZC3H15Q8WU90 426 aaKnown RBP18.08■□□□□ 0.49
CDK11A-204ENST00000358779 DPF3Q92784 378 aa18.08■□□□□ 0.49
CDK11A-204ENST00000358779 LENG1Q96BZ8 264 aaPredicted RBP18.08■□□□□ 0.49
CDK11A-204ENST00000358779 CELF6Q96J87 481 aaKnown RBP18.08■□□□□ 0.49
CDK11A-204ENST00000358779 CNDP1Q96KN2 507 aa18.08■□□□□ 0.49
CDK11A-204ENST00000358779 APBA2Q99767 749 aa18.08■□□□□ 0.49
CDK11A-204ENST00000358779 WDCPQ9H6R7 721 aa18.08■□□□□ 0.49
CDK11A-204ENST00000358779 MYLKQ15746 1914 aa18.08■□□□□ 0.48
CDK11A-204ENST00000358779 MYBPHLA2RUH7 354 aa18.08■□□□□ 0.48
CDK11A-204ENST00000358779 H3BNX3 289 aa18.08■□□□□ 0.48
CDK11A-204ENST00000358779 F9P00740 461 aa18.08■□□□□ 0.48
CDK11A-204ENST00000358779 THRAP10827 490 aa18.08■□□□□ 0.48
CDK11A-204ENST00000358779 NUDT2P50583 147 aa18.08■□□□□ 0.48
CDK11A-204ENST00000358779 RPL14P50914 215 aaKnown RBP18.08■□□□□ 0.48
CDK11A-204ENST00000358779 PAPOLAP51003 745 aaKnown RBP18.08■□□□□ 0.48
CDK11A-204ENST00000358779 ZNF135P52742 658 aaPredicted RBP18.08■□□□□ 0.48
CDK11A-204ENST00000358779 HK2P52789 917 aa18.08■□□□□ 0.48
CDK11A-204ENST00000358779 CRYBB1P53674 252 aaPredicted RBP18.08■□□□□ 0.48
CDK11A-204ENST00000358779 USP10Q14694 798 aaKnown RBP18.08■□□□□ 0.48
CDK11A-204ENST00000358779 TRIP10Q15642 601 aa18.08■□□□□ 0.48
CDK11A-204ENST00000358779 PRAMEF19Q5SWL8 479 aa18.08■□□□□ 0.48
CDK11A-204ENST00000358779 BHLHA9Q7RTU4 235 aa18.08■□□□□ 0.48
CDK11A-204ENST00000358779 PLEKHH3Q7Z736 793 aa18.08■□□□□ 0.48
CDK11A-204ENST00000358779 KBTBD6Q86V97 674 aa18.08■□□□□ 0.48
CDK11A-204ENST00000358779 SNX32Q86XE0 403 aa18.08■□□□□ 0.48
CDK11A-204ENST00000358779 TMEM151AQ8N4L1 468 aa18.08■□□□□ 0.48
CDK11A-204ENST00000358779 SCYL1Q96KG9 808 aa18.08■□□□□ 0.48
CDK11A-204ENST00000358779 PPP1R36Q96LQ0 422 aa18.08■□□□□ 0.48
CDK11A-204ENST00000358779 CCDC28BQ9BUN5 200 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms