RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 RMDN1Q96DB5 314 aa6.95□□□□□ -1.3
RTN4-203ENST00000357376 DNAJC1Q96KC8 554 aaKnown RBP6.95□□□□□ -1.3
RTN4-203ENST00000357376 RBBP8Q99708 897 aa6.95□□□□□ -1.3
RTN4-203ENST00000357376 IL22Q9GZX6 179 aa6.95□□□□□ -1.3
RTN4-203ENST00000357376 DRC3Q9H069 523 aa6.95□□□□□ -1.3
RTN4-203ENST00000357376 DMAP1Q9NPF5 467 aaPredicted RBP6.95□□□□□ -1.3
RTN4-203ENST00000357376 LZTS1Q9Y250 596 aa6.95□□□□□ -1.3
RTN4-203ENST00000357376 RAP2CQ9Y3L5 183 aa6.95□□□□□ -1.3
RTN4-203ENST00000357376 ZBBXA8MT70 800 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 SLCO1B7G3V0H7 640 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 AP3B1O00203 1094 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 VAV1P15498 845 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 ITGAXP20702 1163 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 CCNFP41002 786 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 GRM5P41594 1212 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 PCLAFQ15004 111 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 CNPY1Q3B7I2 92 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 LIPMQ5VYY2 423 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 SLC9A4Q6AI14 798 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 CTU1Q7Z7A3 348 aaKnown RBP6.94□□□□□ -1.3
RTN4-203ENST00000357376 ZBTB46Q86UZ6 589 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 NT5DC4Q86YG4 428 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 KBTBD2Q8IY47 623 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 PLD6Q8N2A8 252 aaKnown RBP6.94□□□□□ -1.3
RTN4-203ENST00000357376 FAM193BQ96PV7 902 aaPredicted RBP6.94□□□□□ -1.3
RTN4-203ENST00000357376 NT5MQ9NPB1 228 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 NDUFA13Q9P0J0 144 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 A6NHS1 94 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 ZNF839A8K0R7 811 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 SUPT3HB4E1H0 165 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 GSTA4O15217 222 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 NCAM2O15394 837 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 SNX2O60749 519 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 IQCF3P0C7M6 154 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 DHRS4L1P0CG22 281 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 FGF3P11487 239 aaPredicted RBP6.94□□□□□ -1.3
RTN4-203ENST00000357376 MLNP12872 115 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 TFEBP19484 476 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 PCSK1P29120 753 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 PTPN9P43378 593 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 HSPA13P48723 471 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 NPY2RP49146 381 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 LIMK2P53671 638 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 MAPK10P53779 464 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 PITX1P78337 314 aaPredicted RBP6.94□□□□□ -1.3
RTN4-203ENST00000357376 MPP1Q00013 466 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 FOXD4Q12950 439 aaPredicted RBP6.94□□□□□ -1.3
RTN4-203ENST00000357376 GRIK3Q13003 919 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 SNAPC2Q13487 334 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 ZNF235Q14590 738 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 INPP5AQ14642 412 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 CCDC142Q17RM4 750 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 CTC1Q2NKJ3 1217 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 ZNF618Q5T7W0 954 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 SYPL2Q5VXT5 272 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 STRADAQ7RTN6 431 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 MIB1Q86YT6 1006 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 SPATA2LQ8IUW3 424 aaPredicted RBP6.94□□□□□ -1.3
RTN4-203ENST00000357376 THEM5Q8N1Q8 247 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 CXorf38Q8TB03 319 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 C12orf42Q96LP6 360 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 UBE2OQ9C0C9 1292 aaKnown RBP6.94□□□□□ -1.3
RTN4-203ENST00000357376 C20orf27Q9GZN8 174 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 CCDC90BQ9GZT6 254 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 PNPLA8Q9NP80 782 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 DNAJC28Q9NX36 388 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 GPRC5DQ9NZD1 345 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 PSMD13Q9UNM6 376 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 CRYL1Q9Y2S2 319 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 ANGPTL3Q9Y5C1 460 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 PCDHB12Q9Y5F1 795 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 MYO18AQ92614 2054 aaKnown RBP6.94□□□□□ -1.3
RTN4-203ENST00000357376 MAGEB16A2A368 324 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 RRN3P2A6NIE6 340 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 C9JVG2 144 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 PSMD3O43242 534 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 RNASEH1O60930 286 aaKnown RBP6.94□□□□□ -1.3
RTN4-203ENST00000357376 MT-CYBP00156 380 aaPredicted RBP6.94□□□□□ -1.3
RTN4-203ENST00000357376 AOC1P19801 751 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 BDNFP23560 247 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 NMBRP28336 390 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 ADRA1BP35368 520 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 GEMP55040 296 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 RBBP7Q16576 425 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 PRAMEF19Q5SWL8 479 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 ZFP1Q6P2D0 407 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 C16orf87Q6PH81 154 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 LPCAT2Q7L5N7 544 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 DENND6AQ8IWF6 608 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 NXNL1Q96CM4 212 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 CDCA5Q96FF9 252 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 TSPAN17Q96FV3 270 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 ZFP42Q96MM3 310 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 TBL1YQ9BQ87 522 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 RTKNQ9BST9 563 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 DHRS4Q9BTZ2 278 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 CCDC106Q9BWC9 280 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 ADNPQ9H2P0 1102 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 CATSPERBQ9H7T0 1116 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 SPC25Q9HBM1 224 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms