RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 KPNA1P52294 538 aaPredicted RBP8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 THOP1P52888 689 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 C21orf59P57076 290 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 ATP1A4Q13733 1029 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 SIX5Q8N196 739 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 CCDC185Q8N715 623 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 MCUQ8NE86 351 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 CXorf38Q8TB03 319 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 RCN3Q96D15 328 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 TEPSINQ96N21 525 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 BCO2Q9BYV7 579 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 ZNF696Q9H7X3 374 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 SPON1Q9HCB6 807 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 UBP1Q9NZI7 540 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 DTLQ9NZJ0 730 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 ADA2Q9NZK5 511 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 AKT3Q9Y243 479 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 HES2Q9Y543 173 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 CDY2AQ9Y6F7 541 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 CDY1Q9Y6F8 540 aa8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 COL2A1P02458 1487 aaPredicted RBP8.39□□□□□ -1.07
CDC42SE1-201ENST00000357235 A0A096LPK6 155 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 TNFRSF10AO00220 468 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 RNF103O00237 685 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 ENDOD1O94919 500 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 LTFP02788 710 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 S100BP04271 92 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 EIF2S1P05198 315 aaKnown RBP8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 PGK2P07205 417 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 THRAP10827 490 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 TPH1P17752 444 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 ARL4AP40617 200 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 GARSP41250 739 aaKnown RBP8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 GSSP48637 474 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 SLC5A3P53794 718 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 TMEM132DQ14C87 1099 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 DCAF6Q58WW2 860 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 GLRA4Q5JXX5 417 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 SLC9A4Q6AI14 798 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 PGM2L1Q6PCE3 622 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 VASH1Q7L8A9 365 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 FASTKD5Q7L8L6 764 aaKnown RBP8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 TP53INP2Q8IXH6 220 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 SPATA6LQ8N4H0 392 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 TRIML2Q8N7C3 387 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 CCNYL1Q8N7R7 359 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 OR52K1Q8NGK4 314 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 COPS5Q92905 334 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 EFHD2Q96C19 240 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 KIF12Q96FN5 646 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 CEP295NLQ96MC4 621 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 CSPG4P5Q96PW8 444 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 SERPINI1Q99574 410 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 C20orf96Q9NUD7 363 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 SLC38A7Q9NVC3 462 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 GGA3Q9NZ52 723 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.38□□□□□ -1.078e-7■■□□□ 12.8
CDC42SE1-201ENST00000357235 KLHL8Q9P2G9 620 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 SLC39A10Q9ULF5 831 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 CENPFP49454 3210 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 SOBPA7XYQ1 873 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 H3BNX3 289 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 TK2O00142 265 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 TIMM44O43615 452 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 ZBTB11O95625 1053 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 CRTAMO95727 393 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 POLBP06746 335 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 PTPRAP18433 802 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 HMOX2P30519 316 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 TUBA4AP68366 448 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 SLC6A3Q01959 620 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 IFRD2Q12894 506 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 NME3Q13232 169 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 TARBP2Q15633 366 aaKnown RBP8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 ZNF829Q3KNS6 432 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 PPP2R2DQ66LE6 453 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 ITPRIPL1Q6GPH6 555 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 AMIGO2Q86SJ2 522 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 KBTBD6Q86V97 674 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 BPHLQ86WA6 291 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 TTC30AQ86WT1 665 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 IFNLR1Q8IU57 520 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 DSELQ8IZU8 1212 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 RNF169Q8NCN4 708 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 APBB2Q92870 758 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 SGF29Q96ES7 293 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 SPATA17Q96L03 361 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 ZNF670Q9BS34 389 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 GCOM2Q9BZD3 368 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 TASP1Q9H6P5 420 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 AS3MTQ9HBK9 375 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 ANLNQ9NQW6 1124 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 PGAP2Q9UHJ9 254 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 HACL1Q9UJ83 578 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 GNEQ9Y223 722 aaKnown RBP8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 MRPL42Q9Y6G3 142 aaKnown RBP8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 KIAA1217Q5T5P2 1943 aa8.38□□□□□ -1.07
CDC42SE1-201ENST00000357235 A0A087WZ62 844 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 A0A1B0GTW7 788 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 NOTOA8MTQ0 251 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms